RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 TSPAN18Q96SJ8 248 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 CPNE1Q99829 537 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 ZNF212Q9UDV6 495 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 ACTL7AQ9Y615 435 aa13.89□□□□□ -0.19
CCDC142-202ENST00000393965 DOCK4Q8N1I0 1966 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 A0A088AWK7 358 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 JUNP05412 331 aaKnown RBP13.88□□□□□ -0.19
CCDC142-202ENST00000393965 HMBSP08397 361 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
CCDC142-202ENST00000393965 IDH3AP50213 366 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 MPP3Q13368 585 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 TUSC3Q13454 348 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 ART3Q13508 389 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 TRMT5Q32P41 509 aaKnown RBP13.88□□□□□ -0.19
CCDC142-202ENST00000393965 BTBD8Q5XKL5 378 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 CCSAPQ6IQ19 270 aaPredicted RBP13.88□□□□□ -0.19
CCDC142-202ENST00000393965 DHDDSQ86SQ9 333 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 NPAS2Q99743 824 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 MCMBPQ9BTE3 642 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 TRIM8Q9BZR9 551 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 NOL6Q9H6R4 1146 aaKnown RBP13.88□□□□□ -0.19
CCDC142-202ENST00000393965 SSX2IPQ9Y2D8 614 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 NEMP2A6NFY4 417 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 J3KR12 359 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 SEPT4O43236 478 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 FOXD2O60548 495 aaPredicted RBP13.88□□□□□ -0.19
CCDC142-202ENST00000393965 VAPBO95292 243 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 ARL1P40616 181 aaPredicted RBP13.88□□□□□ -0.19
CCDC142-202ENST00000393965 HCAR3P49019 387 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 ARPP19P56211 112 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 DNAL1Q4LDG9 190 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 HABP4Q5JVS0 413 aaKnown RBP13.88□□□□□ -0.19
CCDC142-202ENST00000393965 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 TMEM151AQ8N4L1 468 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 ATAD1Q8NBU5 361 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 KCTD4Q8WVF5 259 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 PIF1Q9H611 641 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 ARHGEF38Q9NXL2 777 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 DTNAQ9Y4J8 743 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 FRMPD3Q5JV73 1810 aa13.88□□□□□ -0.19
CCDC142-202ENST00000393965 HNRNPRO43390 633 aaKnown RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 HNRNPLP14866 589 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 ACTR3P61158 418 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 KRT72Q14CN4 511 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 TRIM71Q2Q1W2 868 aaKnown RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 ALFQ53S48 1182 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 GRTP1Q5TC63 336 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 LDB1Q86U70 411 aaPredicted RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 METTL23Q86XA0 190 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 SPATA2LQ8IUW3 424 aaPredicted RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 RCN3Q96D15 328 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 SLC45A3Q96JT2 553 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 CRISPLD1Q9H336 500 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 SUDS3Q9H7L9 328 aaPredicted RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 S100A14Q9HCY8 104 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 DCDC2Q9UHG0 476 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 CDH22Q9UJ99 828 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 POMPQ9Y244 141 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 SLC27A5Q9Y2P5 690 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 ZBTB14O43829 449 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 CYP11A1P05108 521 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 HAPLN1P10915 354 aaPredicted RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 MAGEA12P43365 314 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 OR1G1P47890 313 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 FCGRTP55899 365 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 YWHAHQ04917 246 aaPredicted RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 RALGDSQ12967 914 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 FLOT2Q14254 428 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 RNF111Q6ZNA4 994 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 ZNF598Q86UK7 904 aaKnown RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 TRIM42Q8IWZ5 723 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 ATPAF2Q8N5M1 289 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 PRRC2BQ5JSZ5 2229 aaKnown RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 AHCYL1O43865 530 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 PFDN1O60925 122 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 VCLP18206 1134 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 CNTFP26441 200 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 CASP2P42575 452 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 ABCE1P61221 599 aaKnown RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 ROR2Q01974 943 aaKnown RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 FOLH1Q04609 750 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 PDK3Q15120 406 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 AMIGO2Q86SJ2 522 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 CLEC14AQ86T13 490 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 IFNEQ86WN2 208 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 TDRD5Q8NAT2 981 aaKnown RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 NDNQ99608 321 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 FERMT1Q9BQL6 677 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 CENPKQ9BS16 269 aa13.87□□□□□ -0.19
CCDC142-202ENST00000393965 UPF3AQ9H1J1 476 aaKnown RBP13.87□□□□□ -0.19
CCDC142-202ENST00000393965 NT5C1B-RDH14C9J2C7 533 aa13.86□□□□□ -0.19
CCDC142-202ENST00000393965 E9PAM4 449 aa13.86□□□□□ -0.19
CCDC142-202ENST00000393965 ZNF623O75123 536 aa13.86□□□□□ -0.19
CCDC142-202ENST00000393965 F9P00740 461 aa13.86□□□□□ -0.19
CCDC142-202ENST00000393965 SERPINE1P05121 402 aa13.86□□□□□ -0.19
CCDC142-202ENST00000393965 PLIN5Q00G26 463 aa13.86□□□□□ -0.19
CCDC142-202ENST00000393965 IRF5Q13568 498 aa13.86□□□□□ -0.19
CCDC142-202ENST00000393965 LRRC43Q8N309 656 aa13.86□□□□□ -0.19
CCDC142-202ENST00000393965 C1QTNF1Q9BXJ1 281 aa13.86□□□□□ -0.19
CCDC142-202ENST00000393965 PRM3Q9NNZ6 103 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms