RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TGM1P22735 817 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 MAOBP27338 520 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 HSPA9P38646 679 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 CETN2P41208 172 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 NEK3P51956 506 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 RWDD2BP57060 319 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 DYNLT1P63172 113 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 PIP5KL1Q5T9C9 394 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 AGBL4Q5VU57 503 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 KAZNQ674X7 775 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 RABEPKQ7Z6M1 372 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 NT5DC3Q86UY8 548 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 CEP76Q8TAP6 659 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 SNX19Q92543 992 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 KLHL32Q96NJ5 620 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 TMEM74BQ9NUR3 256 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 SUSD2Q9UGT4 822 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 TPX2Q9ULW0 747 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 USP34Q70CQ2 3546 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 SHROOM3Q8TF72 1996 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 C16orf96A6NNT2 1141 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 MATN3O15232 486 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 INSIG1O15503 277 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 CST8O60676 142 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 PTMAP06454 111 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 KRT10P13645 584 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 GNSP15586 552 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 MMP13P45452 471 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 NR2C2P49116 596 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 SCNN1BP51168 640 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 CCR5P51681 352 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 COPS2P61201 443 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 HNRNPDQ14103 355 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 GSE1Q14687 1217 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 ZNF662Q6ZS27 426 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 BZW1Q7L1Q6 419 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 KIAA2013Q8IYS2 634 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 C12orf50Q8NA57 414 aaPredicted RBP19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 FATE1Q969F0 183 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 BIRC7Q96CA5 298 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 TUBGCP5Q96RT8 1024 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 MIR1-1HGQ9H1L0 117 aa19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 EIF2B4Q9UI10 523 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 ATXN2Q99700 1313 aaKnown RBP19.24■□□□□ 0.67
PDLIM7-204ENST00000393546 TNRC6BQ9UPQ9 1833 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 MIF4GDA9UHW6 222 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 KHNYNO15037 678 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 ADRB3P13945 408 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 MAPK8P45983 427 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 RGRP47804 291 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 PEX5P50542 639 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 PDK1Q15118 436 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 LLGL1Q15334 1064 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 PPP2R5EQ16537 467 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 DUOXA1Q1HG43 343 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 PEAR1Q5VY43 1037 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 NEK5Q6P3R8 708 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 NPNTQ6UXI9 565 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 PARS2Q7L3T8 475 aaKnown RBP19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 TEX26Q8N6G2 289 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 UBL4BQ8N7F7 174 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 HCAR2Q8TDS4 363 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 UBE2Q2Q8WVN8 375 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 RAB7BQ96AH8 199 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 VOPP1Q96AW1 172 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 HDAC11Q96DB2 347 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 ZNF641Q96N77 438 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 BRD8Q9H0E9 1235 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 SMOC1Q9H4F8 434 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 SUV39H2Q9H5I1 410 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 ATP13A3Q9H7F0 1226 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 PREBQ9HCU5 417 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 HAUS2Q9NVX0 235 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 DKK3Q9UBP4 350 aa19.23■□□□□ 0.67
PDLIM7-204ENST00000393546 hCG_1818297A0A087WSY0 165 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 PPP1R12AO14974 1030 aaPredicted RBP19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 MUSKO15146 869 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 NEBLO76041 1014 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 FTCDO95954 541 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 IGHV4-34P06331 123 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 TGM2P21980 687 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 CD27P26842 260 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 TAS2R38P59533 333 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 AP1S1P61966 158 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 BCL2L1Q07817 233 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 SF3A2Q15428 464 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 PRR23CQ6ZRP0 262 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 TTC7BQ86TV6 843 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 PRPF39Q86UA1 669 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 CCDC13Q8IYE1 715 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 MAML1Q92585 1016 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 NUSAP1Q9BXS6 441 aaKnown RBP19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 NT5MQ9NPB1 228 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 SCUBE2Q9NQ36 999 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 LZTFL1Q9NQ48 299 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 CAPN6Q9Y6Q1 641 aa19.22■□□□□ 0.67
PDLIM7-204ENST00000393546 PI4KAP42356 2102 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 GVINP1Q7Z2Y8 2422 aa19.21■□□□□ 0.67
PDLIM7-204ENST00000393546 FRYLO94915 3013 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms