RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 FAM72DQ6L9T8 149 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 EFCAB12Q6NXP0 572 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 TIFABQ6ZNK6 161 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 FAM72BQ86X60 149 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 SHCBP1Q8NEM2 672 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 ELMO1Q92556 727 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 FDXACB1Q9BRP7 624 aaPredicted RBP16.54■□□□□ 0.24
PHTF1-205ENST00000393357 VPS33BQ9H267 617 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 R3HDMLQ9H3Y0 253 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 RPF2Q9H7B2 306 aaKnown RBP16.54■□□□□ 0.24
PHTF1-205ENST00000393357 KLK14Q9P0G3 267 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 MICAL3Q7RTP6 2002 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 M0QYT0 321 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 NRP2O60462 931 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 BCAP31P51572 246 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 STXBP2Q15833 593 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 ZNF618Q5T7W0 954 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 LYSMD3Q7Z3D4 306 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 HDAC11Q96DB2 347 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 PCYT2Q99447 389 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 FRMD8Q9BZ67 464 aaPredicted RBP16.54■□□□□ 0.24
PHTF1-205ENST00000393357 DUS2Q9NX74 493 aaKnown RBP16.54■□□□□ 0.24
PHTF1-205ENST00000393357 CACNA2D2Q9NY47 1150 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 CACNG4Q9UBN1 327 aa16.54■□□□□ 0.24
PHTF1-205ENST00000393357 TMEM221A6NGB7 291 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 CFAP99D6REC4 459 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 PMPCBO75439 489 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 SERPINB7O75635 380 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 GABBR2O75899 941 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 SRP72O76094 671 aaKnown RBP16.53■□□□□ 0.24
PHTF1-205ENST00000393357 PFKMP08237 780 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 NFKB1P19838 968 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 MAGEA3P43357 314 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 RAD23AP54725 363 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 LAMC2Q13753 1193 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 CCDC92Q53HC0 331 aaPredicted RBP16.53■□□□□ 0.24
PHTF1-205ENST00000393357 CARM1Q86X55 608 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 LSMEM2Q8N112 164 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 CORO1BQ9BR76 489 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 LRRC40Q9H9A6 602 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 MKS1Q9NXB0 559 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 SLC2A6Q9UGQ3 507 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 CROTQ9UKG9 612 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 FADS3Q9Y5Q0 445 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 CNTNAP1P78357 1384 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 FAM189A1O60320 539 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 DDHD2O94830 711 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 ENDOD1O94919 500 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 TPSB2P20231 275 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 MATN1P21941 496 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 BDNFP23560 247 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 RHDQ02161 417 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 GSTM4Q03013 218 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 TPSAB1Q15661 275 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 SAMD7Q7Z3H4 446 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 SPAG4Q9NPE6 437 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 BTRCQ9Y297 605 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 BRCA2P51587 3418 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 BAIAP3O94812 1187 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 LMO2P25791 158 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 TXNDC5Q8NBS9 432 aaKnown RBP16.53■□□□□ 0.24
PHTF1-205ENST00000393357 TAMM41Q96BW9 452 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 ASB9Q96DX5 294 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 AASSQ9UDR5 926 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 SLC8A2Q9UPR5 921 aa16.53■□□□□ 0.24
PHTF1-205ENST00000393357 H3BMM5 538 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 WNT10BO00744 389 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 NDUFB5O43674 189 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 HUS1O60921 280 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 AHSGP02765 367 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 PIM1P11309 404 aaPredicted RBP16.52■□□□□ 0.24
PHTF1-205ENST00000393357 SURF1Q15526 300 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
PHTF1-205ENST00000393357 RWDD4Q6NW29 188 aaKnown RBP16.52■□□□□ 0.24
PHTF1-205ENST00000393357 LZTR1Q8N653 840 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 DQX1Q8TE96 717 aaKnown RBP16.52■□□□□ 0.24
PHTF1-205ENST00000393357 NUDT8Q8WV74 236 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 VPS33AQ96AX1 596 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 ZNF597Q96LX8 424 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 QKIQ96PU8 341 aaKnown RBP eCLIP16.52■□□□□ 0.24
PHTF1-205ENST00000393357 SLC2A11Q9BYW1 496 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 DRC3Q9H069 523 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 SNX25Q9H3E2 840 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 PRDM8Q9NQV8 689 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 ACOT9Q9Y305 439 aa16.52■□□□□ 0.24
PHTF1-205ENST00000393357 LRRC14BA6NHZ5 514 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 SDHDO14521 159 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 BCL10O95999 233 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 TXNP10599 105 aaKnown RBP16.52■□□□□ 0.23
PHTF1-205ENST00000393357 IL7RP16871 459 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 TMEM132DQ14C87 1099 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 RABL3Q5HYI8 236 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 ZNF362Q5T0B9 420 aaPredicted RBP16.52■□□□□ 0.23
PHTF1-205ENST00000393357 TBC1D15Q8TC07 691 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 DLG3Q92796 817 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 HBEGFQ99075 208 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 ZNF670Q9BS34 389 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 GBA2Q9HCG7 927 aaPredicted RBP16.52■□□□□ 0.23
PHTF1-205ENST00000393357 ITM2CQ9NQX7 267 aa16.52■□□□□ 0.23
PHTF1-205ENST00000393357 DPP3Q9NY33 737 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms