RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 FSCBQ5H9T9 825 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 CNTN4Q8IWV2 1026 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 SLC25A41Q8N5S1 370 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 LEMD2Q8NC56 503 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 SAMD11Q96NU1 681 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 MCMBPQ9BTE3 642 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 YY1AP1Q9H869 796 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 SLC17A7Q9P2U7 560 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 OR51B4Q9Y5P0 310 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 ACTL7AQ9Y615 435 aa11.58□□□□□ -0.56
SMARCAL1-203ENST00000392128 CBX4O00257 560 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 EBAG9O00559 213 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 RFPL2O75678 378 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 ZMPSTE24O75844 475 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 PAPSS2O95340 614 aaPredicted RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 ALDOAP04075 364 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 PAMP19021 973 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 CR2P20023 1033 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 HLA-DPA1P20036 260 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 TAC1P20366 129 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 FOXN2P32314 431 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 SPRP35270 261 aaPredicted RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 ARCN1P48444 511 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 LIMK2P53671 638 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 CDH18Q13634 790 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 SIRPB2Q5JXA9 342 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 GPR158Q5T848 1215 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 GKAP1Q5VSY0 366 aaPredicted RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 RNF43Q68DV7 783 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 KIAA0930Q6ICG6 404 aaPredicted RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 STRA8Q7Z7C7 330 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 BBS7Q8IWZ6 715 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 TDRD5Q8NAT2 981 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 ISL2Q96A47 359 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 SRPK1Q96SB4 655 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 AGAP2Q99490 1192 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 FEM1AQ9BSK4 669 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 IQCGQ9H095 443 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 VPS11Q9H270 941 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 DNMT3BQ9UBC3 853 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 SIN3BO75182 1162 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 MOSPD3O75425 235 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 GJB3O75712 270 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 FGF1P05230 155 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 POU2F2P09086 479 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 EPCAMP16422 314 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 CRHR1P34998 444 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 NUMBP49757 651 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 HNRNPH2P55795 449 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 CDK18Q07002 472 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 CYTH1Q15438 398 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 MPPE1Q53F39 396 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 ARHGAP15Q53QZ3 475 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 INO80DQ53TQ3 878 aaPredicted RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 ESRP1Q6NXG1 681 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 PIGWQ7Z7B1 504 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 SPATS2Q86XZ4 545 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 CMTM8Q8IZV2 173 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 DCAF4L2Q8NA75 395 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 ALG14Q96F25 216 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 IFT43Q96FT9 208 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 IARS2Q9NSE4 1012 aaKnown RBP11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 GGA2Q9UJY4 613 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 PLLPQ9Y342 182 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 ANKRD36A6QL64 1941 aa11.57□□□□□ -0.56
SMARCAL1-203ENST00000392128 E2F8A0AVK6 867 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 GRXCR1A8MXD5 290 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 INSIG1O15503 277 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 TIMM44O43615 452 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 XYLBO75191 536 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 CD160O95971 181 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 CA3P07451 260 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 RHOP08100 348 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 ARNTP27540 789 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 MZF1P28698 734 aaPredicted RBP11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 MAGEA12P43365 314 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 SEPT6Q14141 434 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 SMAD1Q15797 465 aaKnown RBP11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 C9orf50Q5SZB4 431 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 CDHR3Q6ZTQ4 885 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 NLRP9Q7RTR0 991 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 MFN1Q8IWA4 741 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 NDUFAF2Q8N183 169 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 DDI1Q8WTU0 396 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 TCEAL4Q96EI5 215 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 SEC16BQ96JE7 1060 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 TRIB3Q96RU7 358 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 TASP1Q9H6P5 420 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 NOD2Q9HC29 1040 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 PCMTD2Q9NV79 361 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 DPP7Q9UHL4 492 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 VPS28Q9UK41 221 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 ATG2AQ2TAZ0 1938 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 CCDC78A2IDD5 438 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 MROH6A6NGR9 719 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 TPP1O14773 563 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 AVPR1AP37288 418 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 CSKP41240 450 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 RGRP47804 291 aa11.56□□□□□ -0.56
SMARCAL1-203ENST00000392128 PDE1BQ01064 536 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms