RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 FOXD2O60548 495 aaPredicted RBP15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 NEBLO76041 1014 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 KRT10P13645 584 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 ITPKAP23677 461 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 PTPN7P35236 360 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 PEX5P50542 639 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 AP1S1P61966 158 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 PPIDQ08752 370 aaKnown RBP15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 SPEM2Q0P670 501 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 CFAP58Q5T655 872 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 PIP5KL1Q5T9C9 394 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 PEAR1Q5VY43 1037 aaPredicted RBP15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 FBXL19Q6PCT2 694 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 PARS2Q7L3T8 475 aaKnown RBP15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 SRLQ86TD4 932 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 CCDC13Q8IYE1 715 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 DCLK2Q8N568 766 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 DNASE2BQ8WZ79 361 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 SNX19Q92543 992 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 MAML1Q92585 1016 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 RAB7BQ96AH8 199 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 ZNF641Q96N77 438 aaPredicted RBP15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 MGME1Q9BQP7 344 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 BRD8Q9H0E9 1235 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 ATP13A3Q9H7F0 1226 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 PREBQ9HCU5 417 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 SUSD2Q9UGT4 822 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 PILRBQ9UKJ0 227 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 EFR3BQ9Y2G0 817 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 PPP2R2CQ9Y2T4 447 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 NUMA1Q14980 2115 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 CEP192Q8TEP8 1941 aa15.23■□□□□ 0.03
IGHV3-53-201ENST00000390627 C16orf96A6NNT2 1141 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 RNF103O00237 685 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 INSIG1O15503 277 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 FSBPO95073 299 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 ADRB3P13945 408 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 GNSP15586 552 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 SERPINA4P29622 427 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 RGRP47804 291 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 SCNN1BP51168 640 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 CCR5P51681 352 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 LLGL1Q15334 1064 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 CSRP2Q16527 193 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 RALGPS1Q5JS13 557 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 PLA2G2CQ5R387 149 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 NPNTQ6UXI9 565 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 BBS12Q6ZW61 710 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 TEX26Q8N6G2 289 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 CEP76Q8TAP6 659 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 HCAR2Q8TDS4 363 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 ALG3Q92685 438 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 P3H4Q92791 437 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 KLHL32Q96NJ5 620 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 OLFM3Q96PB7 478 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 NUDCD1Q96RS6 583 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 OSBPL8Q9BZF1 889 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 SEMA4GQ9NTN9 838 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 DKK3Q9UBP4 350 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 AMACRQ9UHK6 382 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 PACSIN2Q9UNF0 486 aaPredicted RBP15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 TNRC6BQ9UPQ9 1833 aaKnown RBP15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 SHROOM3Q8TF72 1996 aa15.22■□□□□ 0.03
IGHV3-53-201ENST00000390627 ATXN2Q99700 1313 aaKnown RBP15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3DA0A087WVF3 549 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3IA0A087WXS9 549 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3EA0A087X179 549 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3KA0A087X1G2 549 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3FA6NER0 549 aaPredicted RBP15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3LB9A6J9 549 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 MUSKO15146 869 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 PIGNO95427 931 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3HP0C7X1 549 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 ZNF806P0C7X5 589 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 CCNB1P14635 433 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 BCL2L1Q07817 233 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 AP1B1Q10567 949 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 CCDC181Q5TID7 509 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3GQ6DHY5 549 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3CQ6IPX1 549 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 NEK5Q6P3R8 708 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 BRAT1Q6PJG6 821 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TBC1D3Q8IZP1 549 aaPredicted RBP15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 C12orf50Q8NA57 414 aaPredicted RBP15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 TRIM58Q8NG06 486 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 VOPP1Q96AW1 172 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 BIRC7Q96CA5 298 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 HES6Q96HZ4 224 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 LGMNQ99538 433 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 POLR1EQ9GZS1 481 aaKnown RBP15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 MIR1-1HGQ9H1L0 117 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 SUV39H2Q9H5I1 410 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 NT5MQ9NPB1 228 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 PARD6AQ9NPB6 346 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 SCUBE2Q9NQ36 999 aa15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 RBM22Q9NW64 420 aaKnown RBP eCLIP15.21■□□□□ 0.03
IGHV3-53-201ENST00000390627 FAM186AA6NE01 2351 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms