RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 H3BRJ5 948 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 TLR4O00206 839 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 AREL1O15033 823 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 INSIG1O15503 277 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 ZZEF1O43149 2961 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 SH3BP5O60239 455 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 PCDHGA12O60330 932 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 DFNA5O60443 496 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 PEX11BO96011 259 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 MAT2AP31153 395 aaKnown RBP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 ABL2P42684 1182 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 FAM193AP78312 1265 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 SHC2P98077 582 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 IL10RBQ08334 325 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 NSUN2Q08J23 767 aaKnown RBP eCLIP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 OVGP1Q12889 678 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 HNRNPDQ14103 355 aaKnown RBP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 FGL2Q14314 439 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 SHBQ15464 509 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 SETMARQ53H47 684 aaPredicted RBP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 GDPD4Q6W3E5 623 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 ARHGAP36Q6ZRI8 547 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 GLRX5Q86SX6 157 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 GAS2L3Q86XJ1 694 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 SPATS2Q86XZ4 545 aaKnown RBP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 CNGA4Q8IV77 575 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 NETO2Q8NC67 525 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 BAHD1Q8TBE0 780 aaPredicted RBP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 HCAR2Q8TDS4 363 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 CTNNBL1Q8WYA6 563 aaPredicted RBP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 GDAP1L1Q96MZ0 367 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 C1QTNF2Q9BXJ5 285 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 ZDHHC6Q9H6R6 413 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 ERVMER34-1Q9H9K5 563 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 RCOR3Q9P2K3 495 aaPredicted RBP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 UBA2Q9UBT2 640 aaPredicted RBP11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 WDFY3Q8IZQ1 3526 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 FREM2Q5SZK8 3169 aa11.55□□□□□ -0.56
IGHV4-28-201ENST00000390612 TSPAN11A1L157 253 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 AKR1B15C9JRZ8 316 aaPredicted RBP11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 KRIT1O00522 736 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 KCNK3O14649 394 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 DAPK3O43293 454 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 AKR1B10O60218 316 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 BUB1BO60566 1050 aaPredicted RBP11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 IGSF6O95976 241 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 UGT2B4P06133 528 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 CD48P09326 243 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 TPM1P09493 284 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 TIMP2P16035 220 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 MAN1A1P33908 653 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 ARL4AP40617 200 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 RGRP47804 291 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 RXRGP48443 463 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 NXPH1P58417 271 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 TAS2R40P59535 323 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 RHOAP61586 193 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 RFTN1Q14699 578 aaPredicted RBP11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 TSR1Q2NL82 804 aaKnown RBP11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 ATP13A4Q4VNC1 1196 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 SEL1L3Q68CR1 1132 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 KIAA1161Q6NSJ0 714 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 FBXL19Q6PCT2 694 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 ZSCAN30Q86W11 494 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 ZNF354CQ86Y25 554 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 NAXDQ8IW45 347 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 TSEN2Q8NCE0 465 aaKnown RBP11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 SLC35G2Q8TBE7 412 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 ASB12Q8WXK4 309 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 HSPH1Q92598 858 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 SKA1Q96BD8 255 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 FEM1CQ96JP0 617 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 CCDC42Q96M95 316 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 NSMCE3Q96MG7 304 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 KLHL32Q96NJ5 620 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 ZNF599Q96NL3 588 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 CAMK1GQ96NX5 476 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 TRIM5Q9C035 493 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 SLC32A1Q9H598 525 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 AASDHPPTQ9NRN7 309 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 GPR27Q9NS67 375 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 SPTLC3Q9NUV7 552 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 CTTNBP2NLQ9P2B4 639 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 IPO11Q9UI26 975 aaKnown RBP11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 LCMT1Q9UIC8 334 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 PCOLCE2Q9UKZ9 415 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 INTUQ9ULD6 942 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 HS3ST3A1Q9Y663 406 aa11.54□□□□□ -0.56
IGHV4-28-201ENST00000390612 KMT2BQ9UMN6 2715 aaPredicted RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 ARHGEF17Q96PE2 2063 aaPredicted RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 MUSKO15146 869 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 SLC31A1O15431 190 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 TSPAN6O43657 245 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 MAFKO60675 156 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 PCDH8O95206 1070 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 LCA5LO95447 670 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 HNRNPA2B1P22626 353 aaKnown RBP11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 FECHP22830 423 aa11.53□□□□□ -0.56
IGHV4-28-201ENST00000390612 C21orf59P57076 290 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms