RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 LSMEM2Q8N112 164 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 FUBP3Q96I24 572 aaKnown RBP eCLIP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 MRPL57Q9BQC6 102 aaKnown RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 ZNF385DQ9H6B1 395 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 NOL6Q9H6R4 1146 aaKnown RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 SLC2A6Q9UGQ3 507 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 PPM1HQ9ULR3 514 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 SSX2IPQ9Y2D8 614 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 RGSL1A5PLK6 1076 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 TMEM189-UBE2V1I3L0A0 370 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 PDHA1P08559 390 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 MTTPP55157 894 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 DNAJB13P59910 316 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 GSTA3Q16772 222 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 LSM12Q3MHD2 195 aaKnown RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 ACAD11Q709F0 780 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 SETD3Q86TU7 594 aaPredicted RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 ARHGAP18Q8N392 663 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 RP9Q8TA86 221 aaKnown RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 NXNL1Q96CM4 212 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 IMP4Q96G21 291 aaKnown RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 C8orf48Q96LL4 319 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 LENG8Q96PV6 779 aaPredicted RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 TTC1Q99614 292 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 MRPL46Q9H2W6 279 aaKnown RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 FBXO44Q9H4M3 255 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 PRDM5Q9NQX1 630 aaPredicted RBP15.12■□□□□ 0.01
SCFD2-201ENST00000388940 VPS45Q9NRW7 570 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 MPP6Q9NZW5 540 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 XPR1Q9UBH6 696 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 ZDHHC2Q9UIJ5 367 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 FBXO5Q9UKT4 447 aa15.12■□□□□ 0.01
SCFD2-201ENST00000388940 HEATR9A2RTY3 570 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 F8W810 466 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 BUD23O43709 281 aaKnown RBP15.11■□□□□ 0.01
SCFD2-201ENST00000388940 SLC10A3P09131 477 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 RHOQP17081 205 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 PAX7P23759 505 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 PIK3R1P27986 724 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 CST5P28325 142 aaPredicted RBP15.11■□□□□ 0.01
SCFD2-201ENST00000388940 GLRBP48167 497 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 RENBPP51606 427 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 WNT3AP56704 352 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 TNK2Q07912 1038 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 DSC1Q08554 894 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 NSUN2Q08J23 767 aaKnown RBP eCLIP15.11■□□□□ 0.01
SCFD2-201ENST00000388940 TBL3Q12788 808 aaKnown RBP15.11■□□□□ 0.01
SCFD2-201ENST00000388940 DLG1Q12959 904 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 CCNIQ14094 377 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 SLC39A12Q504Y0 691 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 PIK3R6Q5UE93 754 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 NEPROQ6NW34 567 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 GALNT7Q86SF2 657 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 NUP93Q8N1F7 819 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 SLC25A41Q8N5S1 370 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 GABPB2Q8TAK5 448 aaPredicted RBP15.11■□□□□ 0.01
SCFD2-201ENST00000388940 SHKBP1Q8TBC3 707 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 CALML6Q8TD86 181 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 RGS18Q9NS28 235 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 PRPF19Q9UMS4 504 aaKnown RBP15.11■□□□□ 0.01
SCFD2-201ENST00000388940 POMPQ9Y244 141 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 PAPSS2O95340 614 aaPredicted RBP15.11■□□□□ 0.01
SCFD2-201ENST00000388940 EOMESO95936 686 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 MOCS2O96007 188 aaPredicted RBP15.11■□□□□ 0.01
SCFD2-201ENST00000388940 EPHB1P54762 984 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 FCGRTP55899 365 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 TAS2R39P59534 338 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 HERC3Q15034 1050 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 TSTD2Q5T7W7 516 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 SCN4BQ8IWT1 228 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 ELMO2Q96JJ3 720 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 SH3GL3Q99963 347 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 SHCBP1LQ9BZQ2 653 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 TMEM248Q9NWD8 314 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 VPS28Q9UK41 221 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 NUDT5Q9UKK9 219 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 GABRQQ9UN88 632 aa15.11■□□□□ 0.01
SCFD2-201ENST00000388940 TTC36A6NLP5 189 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 BAG2O95816 211 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 OR4Q2P0C623 313 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 LEPRP48357 1165 aaKnown RBP15.1■□□□□ 0.01
SCFD2-201ENST00000388940 DSG1Q02413 1049 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 MSLNQ13421 630 aaPredicted RBP15.1■□□□□ 0.01
SCFD2-201ENST00000388940 NFE2Q16621 373 aaPredicted RBP15.1■□□□□ 0.01
SCFD2-201ENST00000388940 ZNF470Q6ECI4 717 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 DHDDSQ86SQ9 333 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 AGR3Q8TD06 166 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 GATA6Q92908 595 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 NR1H4Q96RI1 486 aaPredicted RBP15.1■□□□□ 0.01
SCFD2-201ENST00000388940 ECSITQ9BQ95 431 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 VCXQ9H320 206 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 WDR55Q9H6Y2 383 aaPredicted RBP15.1■□□□□ 0.01
SCFD2-201ENST00000388940 CYP4F11Q9HBI6 524 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 CLIC5Q9NZA1 410 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 IL37Q9NZH6 218 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 CDYLQ9Y232 598 aa15.1■□□□□ 0.01
SCFD2-201ENST00000388940 IGLV3-10A0A075B6K4 115 aa15.09■□□□□ 0.01
SCFD2-201ENST00000388940 GOLGA8QA0A0J9YX86 632 aa15.09■□□□□ 0.01
SCFD2-201ENST00000388940 GOLGA8OA6NCC3 632 aa15.09■□□□□ 0.01
SCFD2-201ENST00000388940 GOLGA8NF8WBI6 632 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms