RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 LHX5Q9H2C1 402 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 SLCO5A1Q9H2Y9 848 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 FN3KQ9H479 309 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 ZNF552Q9H707 407 aaPredicted RBP1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 REEP1Q9H902 201 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 RSAD1Q9HA92 442 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 CD248Q9HCU0 757 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 KCND1Q9NSA2 647 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 ACSS1Q9NUB1 689 aaPredicted RBP1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 HYPKQ9NX55 129 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 P4HTMQ9NXG6 502 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 WHRNQ9P202 907 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 CLIP2Q9UDT6 1046 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 IPO11Q9UI26 975 aaKnown RBP1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 PPIAL4AQ9Y536 164 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 PCDHA1Q9Y5I3 950 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 BACE2Q9Y5Z0 518 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 STON1Q9Y6Q2 735 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 MED12Q93074 2177 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 PTPRJQ12913 1337 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 CCDC171Q6TFL3 1326 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 PKHD1L1Q86WI1 4243 aa1.08□□□□□ -2.24
RNU6-42P-201ENST00000384165 MDN1Q9NU22 5596 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 DNAH11Q96DT5 4516 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CR1P17927 2039 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 IGHV4-30-2A0A087WSY4 118 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 A0A1W2PPR1 153 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CCDC78A2IDD5 438 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CCDC66A2RUB6 948 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CASTOR2A6NHX0 329 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 EYA2O00167 538 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 PEX12O00623 359 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 TTI1O43156 1089 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 AQP9O43315 295 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 SSX4O60224 188 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CPNE6O95741 557 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 MT-ND3P03897 115 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 POU2F1P14859 743 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 SLC25A16P16260 332 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 SELEP16581 610 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 EPHA1P21709 976 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 MMP8P22894 467 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 EIF4BP23588 611 aaKnown RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 RPL13P26373 211 aaKnown RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 NAMPTP43490 491 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 ZFP36L2P47974 494 aaKnown RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 FNTAP49354 379 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CCR5P51681 352 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CCR8P51685 355 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 GALCP54803 685 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 ADKP55263 362 aaKnown RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 RPS6P62753 249 aaKnown RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 PDE1BQ01064 536 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 ZBTB16Q05516 673 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 NEXNQ0ZGT2 675 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 LCP2Q13094 533 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 NCOA4Q13772 614 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 NEDD9Q14511 834 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 ZNF268Q14587 947 aaPredicted RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 TCEAL1Q15170 157 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 DHCR24Q15392 516 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 UPP1Q16831 310 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 AMZ1Q400G9 498 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 TTC31Q49AM3 519 aaPredicted RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 ZC2HC1CQ53FD0 456 aaPredicted RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 AGAP7PQ5VUJ5 663 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 NCEH1Q6PIU2 408 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 PPP4R3CPQ6ZMV5 832 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 RINLQ6ZS11 566 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 Q6ZSN1 163 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 TFAP2DQ7Z6R9 452 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 NT5DC3Q86UY8 548 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 TRIM50Q86XT4 487 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 SLC9A9Q8IVB4 645 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 MCATQ8IVS2 390 aaKnown RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 SLITRK4Q8IW52 837 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 RPAP2Q8IXW5 612 aaPredicted RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 KIAA0319LQ8IZA0 1049 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 TEX29Q8N6K0 151 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 GALNT6Q8NCL4 622 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 GIMAP8Q8ND71 665 aaPredicted RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CATSPER1Q8NEC5 780 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 OR4S1Q8NGB4 309 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 OR2T34Q8NGX1 318 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 SUN3Q8TAQ9 357 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 GRIN3AQ8TCU5 1115 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 DEFB104AQ8WTQ1 72 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 IGFBPL1Q8WX77 278 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 OVCA2Q8WZ82 227 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 RABGGTAQ92696 567 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 DDX12PQ92771 950 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 RNASE6Q93091 150 aaKnown RBP1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CTHRC1Q96CG8 243 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 SEC16BQ96JE7 1060 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 FAM84AQ96KN4 292 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 MYRFLQ96LU7 910 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 CCDC17Q96LX7 622 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 SCLT1Q96NL6 688 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 DACH2Q96NX9 599 aa1.07□□□□□ -2.24
RNU6-42P-201ENST00000384165 AGAP4Q96P64 663 aa1.07□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms