RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 SLC7A2P52569 658 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 POTEHQ6S545 545 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 LDB1Q86U70 411 aaPredicted RBP17.3■□□□□ 0.36
SGCB-201ENST00000381431 PPTC7Q8NI37 304 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 SOCS4Q8WXH5 440 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 SERAC1Q96JX3 654 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 ZMAT2Q96NC0 199 aaKnown RBP17.3■□□□□ 0.36
SGCB-201ENST00000381431 ZNHIT2Q9UHR6 403 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 PADI4Q9UM07 663 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 PTCH2Q9Y6C5 1203 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 CNTNAP1P78357 1384 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 CCL22O00626 93 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 BCL10O95999 233 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 FGFR1P11362 822 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 MLNP12872 115 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 CHN2P52757 468 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 ALDH6A1Q02252 535 aaKnown RBP17.3■□□□□ 0.36
SGCB-201ENST00000381431 BTG3Q14201 252 aaPredicted RBP17.3■□□□□ 0.36
SGCB-201ENST00000381431 CA9Q16790 459 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 USP50Q70EL3 339 aaPredicted RBP17.3■□□□□ 0.36
SGCB-201ENST00000381431 MCOLN3Q8TDD5 553 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 AZIN2Q96A70 460 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 LPIN3Q9BQK8 851 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 CDH19Q9H159 772 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 SDCBP2Q9H190 292 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 GLOD4Q9HC38 313 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 MIEF1Q9NQG6 463 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 HMGXB4Q9UGU5 601 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 ANAPC2Q9UJX6 822 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 MDM4O15151 490 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 DLGAP3O95886 979 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 MAP2K5Q13163 448 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 CRY1Q16526 586 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 PIGWQ7Z7B1 504 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 DENND1CQ8IV53 801 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 ASB2Q96Q27 587 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 DGCR6LQ9BY27 220 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 INVSQ9Y283 1065 aa17.3■□□□□ 0.36
SGCB-201ENST00000381431 BCLAF3A2AJT9 711 aaKnown RBP17.29■□□□□ 0.36
SGCB-201ENST00000381431 ATG7O95352 703 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 CNTN1Q12860 1018 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 RIPK1Q13546 671 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 PEX6Q13608 980 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 ATP1A4Q13733 1029 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 PSMD5Q16401 504 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 CAMK1DQ8IU85 385 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 EID3Q8N140 333 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 CFAP52Q8N1V2 620 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 MLPHQ9BV36 600 aaPredicted RBP17.29■□□□□ 0.36
SGCB-201ENST00000381431 SPAG4Q9NPE6 437 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 TRPC4Q9UBN4 977 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 DYRK1BQ9Y463 629 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 SNX8Q9Y5X2 465 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 TSPAN1O60635 241 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 LMO2P25791 158 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 FBXW4P57775 412 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 MED1Q15648 1581 aaPredicted RBP17.29■□□□□ 0.36
SGCB-201ENST00000381431 KHDC1Q4VXA5 237 aaKnown RBP17.29■□□□□ 0.36
SGCB-201ENST00000381431 ZNF614Q8N883 585 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 ATAD1Q8NBU5 361 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 SELENOMQ8WWX9 145 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 MTIF3Q9H2K0 278 aaKnown RBP17.29■□□□□ 0.36
SGCB-201ENST00000381431 SNX10Q9Y5X0 201 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 A0A087WXM4 84 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 IL1R2P27930 398 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 CDK18Q07002 472 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 DGCR6Q14129 220 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 KCTD21Q4G0X4 260 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 FBXO48Q5FWF7 155 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 ARL13AQ5H913 290 aaPredicted RBP17.29■□□□□ 0.36
SGCB-201ENST00000381431 CCDC103Q8IW40 242 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 TOP6BLQ8N6T0 577 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 MAGED4Q96JG8 741 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 ZFRQ96KR1 1074 aaKnown RBP17.29■□□□□ 0.36
SGCB-201ENST00000381431 YIPF2Q9BWQ6 316 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 RIBC2Q9H4K1 309 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 LNPEPQ9UIQ6 1025 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 CLUHO75153 1309 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 KPNA3O00505 521 aaPredicted RBP17.29■□□□□ 0.36
SGCB-201ENST00000381431 USP2O75604 605 aaPredicted RBP17.29■□□□□ 0.36
SGCB-201ENST00000381431 RASSF9O75901 435 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 LINC00032P0C843 101 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 TPSB2P20231 275 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 MSH3P20585 1137 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 MBTD1Q05BQ5 628 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 TPSAB1Q15661 275 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 FAM45BPQ6NSW5 357 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 FAM45AQ8TCE6 357 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 CLEC4CQ8WTT0 213 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 NXNL1Q96CM4 212 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 GIMAP4Q9NUV9 329 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 TMEM216Q9P0N5 145 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 TMEM59LQ9UK28 342 aa17.29■□□□□ 0.36
SGCB-201ENST00000381431 C15orf38-AP3S2A0A0A6YYH1 394 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 CAPN8A6NHC0 703 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 SLC15A5A6NIM6 579 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 TLR5O60602 858 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 ACSM2AQ08AH3 577 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 ACSM2BQ68CK6 577 aa17.28■□□□□ 0.36
SGCB-201ENST00000381431 ARPINQ7Z6K5 226 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms