RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 ADNPQ9H2P0 1102 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 GID8Q9NWU2 228 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 VPS51Q9UID3 782 aa14.02□□□□□ -0.17
SDC1-202ENST00000381150 TMA7Q9Y2S6 64 aaKnown RBP14.02□□□□□ -0.17
SDC1-202ENST00000381150 C2CD4BA6NLJ0 364 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 CFAP99D6REC4 459 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 BCAS2O75934 225 aaPredicted RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 PIM1P11309 404 aaPredicted RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 HOXA11P31270 313 aaPredicted RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 ZNF143P52747 638 aaPredicted RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 PMS2P3Q13401 168 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 KYAT1Q16773 422 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 PKDCCQ504Y2 493 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 TBCELQ5QJ74 424 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 OTUD3Q5T2D3 398 aaPredicted RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 FAM131BQ86XD5 332 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 TMEM102Q8N9M5 508 aaPredicted RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 HPS1Q92902 700 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 FAM124BQ9H5Z6 455 aaPredicted RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 KLHL8Q9P2G9 620 aaPredicted RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 COPG1Q9Y678 874 aaKnown RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 ANKRD12Q6UB98 2062 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 MATN2O00339 956 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 SERPINB7O75635 380 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 SPRP35270 261 aaPredicted RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 CTBSQ01459 385 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 NANOGP8Q6NSW7 305 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 DCDC5Q6ZRR9 648 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 GPR180Q86V85 440 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 ZC3H7AQ8IWR0 971 aaKnown RBP14.01□□□□□ -0.17
SDC1-202ENST00000381150 KCTD4Q8WVF5 259 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 KHSRPQ92945 711 aaKnown RBP eCLIP14.01□□□□□ -0.17
SDC1-202ENST00000381150 EXT2Q93063 718 aa14.01□□□□□ -0.17
SDC1-202ENST00000381150 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14□□□□□ -0.17
SDC1-202ENST00000381150 PDHXO00330 501 aa14□□□□□ -0.17
SDC1-202ENST00000381150 CLOCKO15516 846 aa14□□□□□ -0.17
SDC1-202ENST00000381150 B4GAT1O43505 415 aa14□□□□□ -0.17
SDC1-202ENST00000381150 GABBR2O75899 941 aa14□□□□□ -0.17
SDC1-202ENST00000381150 NCAM1P13591 858 aa14□□□□□ -0.17
SDC1-202ENST00000381150 SMPD1P17405 629 aa14□□□□□ -0.17
SDC1-202ENST00000381150 TGM2P21980 687 aa14□□□□□ -0.17
SDC1-202ENST00000381150 CA8P35219 290 aa14□□□□□ -0.17
SDC1-202ENST00000381150 PCYT1AP49585 367 aa14□□□□□ -0.17
SDC1-202ENST00000381150 TPD52P55327 224 aaPredicted RBP14□□□□□ -0.17
SDC1-202ENST00000381150 RBP5P82980 135 aa14□□□□□ -0.17
SDC1-202ENST00000381150 TSPY1Q01534 308 aa14□□□□□ -0.17
SDC1-202ENST00000381150 RGS21Q2M5E4 152 aa14□□□□□ -0.17
SDC1-202ENST00000381150 URGCPQ8TCY9 931 aa14□□□□□ -0.17
SDC1-202ENST00000381150 MAGEE2Q8TD90 523 aaPredicted RBP14□□□□□ -0.17
SDC1-202ENST00000381150 LRRC39Q96DD0 335 aa14□□□□□ -0.17
SDC1-202ENST00000381150 CERS2Q96G23 380 aa14□□□□□ -0.17
SDC1-202ENST00000381150 ZMAT2Q96NC0 199 aaKnown RBP14□□□□□ -0.17
SDC1-202ENST00000381150 GBA2Q9HCG7 927 aaPredicted RBP14□□□□□ -0.17
SDC1-202ENST00000381150 IGSF9Q9P2J2 1179 aa14□□□□□ -0.17
SDC1-202ENST00000381150 PRSS51A0A1B0GVH4 220 aa14□□□□□ -0.17
SDC1-202ENST00000381150 HEATR9A2RTY3 570 aa14□□□□□ -0.17
SDC1-202ENST00000381150 NEMP2A6NFY4 417 aa14□□□□□ -0.17
SDC1-202ENST00000381150 TRIM38O00635 465 aa14□□□□□ -0.17
SDC1-202ENST00000381150 LCP1P13796 627 aa14□□□□□ -0.17
SDC1-202ENST00000381150 ZNF24P17028 368 aa14□□□□□ -0.17
SDC1-202ENST00000381150 GRM5P41594 1212 aa14□□□□□ -0.17
SDC1-202ENST00000381150 HARS2P49590 506 aaKnown RBP14□□□□□ -0.17
SDC1-202ENST00000381150 NUMBP49757 651 aa14□□□□□ -0.17
SDC1-202ENST00000381150 BMXP51813 675 aa14□□□□□ -0.17
SDC1-202ENST00000381150 SLC7A2P52569 658 aa14□□□□□ -0.17
SDC1-202ENST00000381150 ZBTB6Q15916 424 aa14□□□□□ -0.17
SDC1-202ENST00000381150 KIF19Q2TAC6 998 aa14□□□□□ -0.17
SDC1-202ENST00000381150 PDCD4Q53EL6 469 aaKnown RBP14□□□□□ -0.17
SDC1-202ENST00000381150 CHSY3Q70JA7 882 aa14□□□□□ -0.17
SDC1-202ENST00000381150 NT5DC4Q86YG4 428 aa14□□□□□ -0.17
SDC1-202ENST00000381150 GTF3C2Q8WUA4 911 aaPredicted RBP14□□□□□ -0.17
SDC1-202ENST00000381150 DLG3Q92796 817 aa14□□□□□ -0.17
SDC1-202ENST00000381150 PBXIP1Q96AQ6 731 aa14□□□□□ -0.17
SDC1-202ENST00000381150 SLC10A4Q96EP9 437 aa14□□□□□ -0.17
SDC1-202ENST00000381150 FRMD8Q9BZ67 464 aaPredicted RBP14□□□□□ -0.17
SDC1-202ENST00000381150 ADAMTS10Q9H324 1103 aa14□□□□□ -0.17
SDC1-202ENST00000381150 MOCS1Q9NZB8 636 aa14□□□□□ -0.17
SDC1-202ENST00000381150 RALGAPA2Q2PPJ7 1873 aa14□□□□□ -0.17
SDC1-202ENST00000381150 GOT1P17174 413 aa14□□□□□ -0.17
SDC1-202ENST00000381150 IL4RP24394 825 aa14□□□□□ -0.17
SDC1-202ENST00000381150 CNTFP26441 200 aa14□□□□□ -0.17
SDC1-202ENST00000381150 ITGA7Q13683 1181 aa14□□□□□ -0.17
SDC1-202ENST00000381150 TRIM25Q14258 630 aaKnown RBP14□□□□□ -0.17
SDC1-202ENST00000381150 GRIK4Q16099 956 aa14□□□□□ -0.17
SDC1-202ENST00000381150 SPPL2CQ8IUH8 684 aa14□□□□□ -0.17
SDC1-202ENST00000381150 SLC15A4Q8N697 577 aa14□□□□□ -0.17
SDC1-202ENST00000381150 HTR3CQ8WXA8 447 aa14□□□□□ -0.17
SDC1-202ENST00000381150 RANBP9Q96S59 729 aa14□□□□□ -0.17
SDC1-202ENST00000381150 NDEL1Q9GZM8 345 aa14□□□□□ -0.17
SDC1-202ENST00000381150 ZFYVE28Q9HCC9 887 aa14□□□□□ -0.17
SDC1-202ENST00000381150 TMPRSS4Q9NRS4 437 aa14□□□□□ -0.17
SDC1-202ENST00000381150 MORF4L1Q9UBU8 362 aa14□□□□□ -0.17
SDC1-202ENST00000381150 TSPAN16Q9UKR8 245 aa14□□□□□ -0.17
SDC1-202ENST00000381150 KIAA1257Q9ULG3 409 aa14□□□□□ -0.17
SDC1-202ENST00000381150 SLC8A2Q9UPR5 921 aa14□□□□□ -0.17
SDC1-202ENST00000381150 RNF103O00237 685 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 PPEF2O14830 753 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 MAN1A2O60476 641 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 SPIDRQ14159 915 aa13.99□□□□□ -0.17
SDC1-202ENST00000381150 BTG3Q14201 252 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms