RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 KRT1P04264 644 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 CTSLP07711 333 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 CD48P09326 243 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 CEACAM1P13688 526 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 CSRP1P21291 193 aaKnown RBP9.39□□□□□ -0.91
HMGN1-202ENST00000380747 COMTP21964 271 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 MAOBP27338 520 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 DPP6P42658 865 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 NOVA1P51513 510 aaKnown RBP9.39□□□□□ -0.91
HMGN1-202ENST00000380747 METAP1P53582 386 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 RHOAP61586 193 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 TCEAL1Q15170 157 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 ODF2Q5BJF6 829 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 SPDYCQ5MJ68 293 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 WDR45BQ5MNZ6 344 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 SYCP2LQ5T4T6 812 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 DCAF12L1Q5VU92 463 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 DPY19L3Q6ZPD9 716 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 USP30Q70CQ3 517 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 KIAA1328Q86T90 577 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 MAP7D3Q8IWC1 876 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 AADATQ8N5Z0 425 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 NPWQ8N729 165 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 ACRBPQ8NEB7 543 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 CADM4Q8NFZ8 388 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 OR6K2Q8NGY2 324 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 GRIN3AQ8TCU5 1115 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 SNX19Q92543 992 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 ZNF592Q92610 1267 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 ZNF419Q96HQ0 510 aaPredicted RBP9.39□□□□□ -0.91
HMGN1-202ENST00000380747 EDEM2Q9BV94 578 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 MIR1-1HGQ9H1L0 117 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 C6orf106Q9H6K1 298 aaPredicted RBP9.39□□□□□ -0.91
HMGN1-202ENST00000380747 ZDHHC6Q9H6R6 413 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 SP110Q9HB58 689 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 DYRK4Q9NR20 520 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 ETNK2Q9NVF9 386 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 IL36AQ9UHA7 158 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 SARDHQ9UL12 918 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 PPM1HQ9ULR3 514 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 CKAP5Q14008 2032 aa9.39□□□□□ -0.91
HMGN1-202ENST00000380747 HELZ2Q9BYK8 2649 aaKnown RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 BPTFQ12830 3046 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 ASH1LQ9NR48 2969 aaKnown RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 CXorf51AA0A1B0GTR3 108 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 LRRD1A4D1F6 860 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 METTL12A8MUP2 240 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 PATE3B3GLJ2 98 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 KRIT1O00522 736 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 KHNYNO15037 678 aaKnown RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 SPOPO43791 374 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 BUB1BO60566 1050 aaPredicted RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 PRAMEF11O60813 436 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 GSRP00390 522 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 CFIP05156 583 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 SERPINB6P35237 376 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 SLC1A1P43005 524 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 ARSEP51690 589 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 CCNHP51946 323 aaPredicted RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 NAP1L1P55209 391 aaKnown RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 GSDMDP57764 484 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 SNRPD1P62314 119 aaKnown RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 CNTN1Q12860 1018 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 DPYSL3Q14195 570 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 PDK2Q15119 407 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 CYTH1Q15438 398 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 INO80DQ53TQ3 878 aaPredicted RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 ATXN7L2Q5T6C5 722 aaPredicted RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 AFMIDQ63HM1 303 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 TCEAL6Q6IPX3 200 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 NCEH1Q6PIU2 408 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 ARHGAP36Q6ZRI8 547 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 SYT12Q8IV01 421 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 ARHGAP12Q8IWW6 846 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 TP53INP2Q8IXH6 220 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 LZTR1Q8N653 840 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 TMIEQ8NEW7 156 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 OR2AP1Q8NGE2 309 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 OR14C36Q8NHC7 312 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 CASKIN2Q8WXE0 1202 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 GATA6Q92908 595 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 TCEAL3Q969E4 200 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 ISG20Q96AZ6 181 aaKnown RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 ARRDC3Q96B67 414 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 HEPHQ9BQS7 1158 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 PDFQ9HBH1 243 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 TMEM74BQ9NUR3 256 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 RCOR3Q9P2K3 495 aaPredicted RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 IPO11Q9UI26 975 aaKnown RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 PILRBQ9UKJ0 227 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 FZD4Q9ULV1 537 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 REXO2Q9Y3B8 237 aaKnown RBP9.38□□□□□ -0.91
HMGN1-202ENST00000380747 WASF2Q9Y6W5 498 aa9.38□□□□□ -0.91
HMGN1-202ENST00000380747 CELSR3Q9NYQ7 3312 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 A0A0A6YYK5 440 aaPredicted RBP9.37□□□□□ -0.91
HMGN1-202ENST00000380747 LNP1A1A4G5 178 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 LRRC72A6NJI9 287 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 RNF103O00237 685 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 LEFTY1O75610 366 aa9.37□□□□□ -0.91
HMGN1-202ENST00000380747 PALMO75781 387 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms