RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 GNA12Q03113 381 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 STX5Q13190 355 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 HNRNPDQ14103 355 aaKnown RBP14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 BOP1Q14137 746 aaKnown RBP14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 PKN3Q6P5Z2 889 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 SPATA6LQ8N4H0 392 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 RAB42Q8N4Z0 105 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 TEX9Q8N6V9 391 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 PPP1R10Q96QC0 940 aaKnown RBP14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 OMDQ99983 421 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 ACE2Q9BYF1 805 aaPredicted RBP14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 SNX15Q9NRS6 342 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 GKN1Q9NS71 199 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 AURKCQ9UQB9 309 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 KNL1Q8NG31 2342 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 BCORQ6W2J9 1755 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 C2P06681 752 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 HTR7P34969 479 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 GRIA1P42261 906 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 GPR15P49685 360 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 POM121L1PQ3SYA9 428 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 ANKS6Q68DC2 871 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 TRMT10BQ6PF06 316 aaKnown RBP14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 LCA5Q86VQ0 697 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 HMCESQ96FZ2 354 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 CENPKQ9BS16 269 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 MECRQ9BV79 373 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 ALG9Q9H6U8 611 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 CPQQ9Y646 472 aa14.33□□□□□ -0.12
SHROOM1-203ENST00000378679 PRPF4O43172 522 aaKnown RBP eCLIP14.32□□□□□ -0.124e-7■■■□□ 17.2
SHROOM1-203ENST00000378679 THRAP10827 490 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 CCNHP51946 323 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 PLIN5Q00G26 463 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 NCBP2-AS2Q69YL0 99 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 RHBDF2Q6PJF5 856 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 PIWIL2Q8TC59 973 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 HAPLN3Q96S86 360 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 TMEM209Q96SK2 561 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 MRPL46Q9H2W6 279 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 ATP13A3Q9H7F0 1226 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 ANKRD6Q9Y2G4 727 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 HBS1LQ9Y450 684 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 C1orf232A0A0U1RR37 186 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 SYNCRIPO60506 623 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 PCDH8O95206 1070 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 CLTBP09497 229 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 LPOP22079 712 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 RPS24P62847 133 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 C16orf89Q6UX73 402 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 NAT16Q8N8M0 369 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 ZNF557Q8N988 423 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 GRIN2DO15399 1336 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 MYH9P35579 1960 aaKnown RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 A0A1B0GVM2 712 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 TCAF2A6NFQ2 919 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 CCL16O15467 120 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 HNRNPCP07910 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 ATP6V1B1P15313 513 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 CALB2P22676 271 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 VEGFBP49765 207 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 KCNK10P57789 538 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 SLC1A5Q15758 541 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 GALNTL6Q49A17 601 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 ANKS1BQ7Z6G8 1248 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 POU5F2Q8N7G0 328 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 NAT8LQ8N9F0 302 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 PXYLP1Q8TE99 480 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 ACTR8Q9H981 624 aa14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.32□□□□□ -0.12
SHROOM1-203ENST00000378679 C8AP07357 584 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 TFEBP19484 476 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 MAPK8P45983 427 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 PPP3CCP48454 512 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 CLCN5P51795 746 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 MLLT6P55198 1093 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 ERAP2Q6P179 960 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 OXNAD1Q96HP4 312 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 HTATIP2Q9BUP3 242 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 SLC25A51Q9H1U9 297 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 RHOJQ9H4E5 214 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 EFCAB1Q9HAE3 211 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 RABGEF1Q9UJ41 708 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 ORC6Q9Y5N6 252 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 FAM237BA0A1B0GVD1 139 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 ITGBL1O95965 494 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 TM4SF4P48230 202 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 GPR17Q13304 367 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 PPIGQ13427 754 aaKnown RBP eCLIP14.31□□□□□ -0.121e-6■■■□□ 16.6
SHROOM1-203ENST00000378679 PPP1R15BQ5SWA1 713 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 UBXN11Q5T124 520 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 USP45Q70EL2 814 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 DNAJB7Q7Z6W7 309 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 SYT11Q9BT88 431 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 CCSER2Q9H7U1 834 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 ZFP37Q9Y6Q3 630 aaPredicted RBP14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 CLUHO75153 1309 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 CCL22O00626 93 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 DCXO43602 365 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 IL2P60568 153 aa14.31□□□□□ -0.12
SHROOM1-203ENST00000378679 RAB10P61026 200 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms