RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PGS1Q32NB8 556 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 RIPOR1Q6ZS17 1223 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 ARCQ7LC44 396 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 P2RY11Q96G91 374 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 TM6SF2Q9BZW4 377 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 PHACTR1Q9C0D0 580 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 PCDHGC3Q9UN70 934 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 PAPSS1O43252 624 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-201ENST00000378156 STAU1O95793 577 aaKnown RBP15.16■□□□□ 0.02
NPHP4-201ENST00000378156 MAPK8P45983 427 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 CREMQ03060 361 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 MSLNQ13421 630 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-201ENST00000378156 SLC44A2Q8IWA5 706 aaPredicted RBP15.16■□□□□ 0.02
NPHP4-201ENST00000378156 MIEF2Q96C03 454 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 NMUR2Q9GZQ4 415 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 C5P01031 1676 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 A0A087X1B8 175 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 ANXA11P50995 505 aaKnown RBP15.16■□□□□ 0.02
NPHP4-201ENST00000378156 SNRPD1P62314 119 aaKnown RBP15.16■□□□□ 0.02
NPHP4-201ENST00000378156 VSTM1Q6UX27 236 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 PACS1Q6VY07 963 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 DPY30Q9C005 99 aa15.16■□□□□ 0.02
NPHP4-201ENST00000378156 MED26O95402 600 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 GDF10P55107 478 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 SLC41A1Q8IVJ1 513 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 GPR152Q8TDT2 470 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 OSCP1Q8WVF1 389 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 SUSD6Q92537 303 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 LRMDAQ9H2I8 198 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 A0A087WXM4 84 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 PNMA8CA0A1B0GUJ8 204 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 MRASO14807 208 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 AHCYL1O43865 530 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 FGFR1P11362 822 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 EIF2B2P49770 351 aaKnown RBP15.15■□□□□ 0.02
NPHP4-201ENST00000378156 C21orf59P57076 290 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 DUSP4Q13115 394 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ARHGAP17Q68EM7 881 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 PRMT9Q6P2P2 845 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 FBXL19Q6PCT2 694 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 MILR1Q7Z6M3 343 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 C10orf107Q8IVU9 208 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 FNDC5Q8NAU1 212 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 SLC4A11Q8NBS3 891 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ASB2Q96Q27 587 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 IGFLR1Q9H665 355 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ADAM30Q9UKF2 790 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 CROTQ9UKG9 612 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ITM2BQ9Y287 266 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 TBC1D3BA6NDS4 549 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 PRR5-ARHGAP8B1AHC4 643 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 SEPT4O43236 478 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 CPSF4O95639 269 aaKnown RBP15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ARHGAP8P85298 464 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 FNDC3BQ53EP0 1204 aaKnown RBP15.15■□□□□ 0.02
NPHP4-201ENST00000378156 PIGWQ7Z7B1 504 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 GPSM1Q86YR5 675 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 SVOPQ8N4V2 548 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 PCDH20Q8N6Y1 951 aaKnown RBP15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ACMSDQ8TDX5 336 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 UBAP1Q9NZ09 502 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 SORCS3Q9UPU3 1222 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 MRPS23Q9Y3D9 190 aaKnown RBP15.15■□□□□ 0.02
NPHP4-201ENST00000378156 EIF2S1P05198 315 aaKnown RBP15.15■□□□□ 0.02
NPHP4-201ENST00000378156 TCF3P15923 654 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 SELPP16109 830 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 CTNNB1P35222 781 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 SMARCB1Q12824 385 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 TRIM71Q2Q1W2 868 aaKnown RBP15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ARMC4Q5T2S8 1044 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ADGRD1Q6QNK2 874 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 ATAD1Q8NBU5 361 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 MED8Q96G25 268 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 SERAC1Q96JX3 654 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 CSPG4P5Q96PW8 444 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 OMDQ99983 421 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 FZD8Q9H461 694 aa15.15■□□□□ 0.02
NPHP4-201ENST00000378156 H3BMM5 538 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 PMM2O15305 246 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 TBL1XO60907 577 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 NBNO60934 754 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 MAXP61244 160 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 NCF4Q15080 339 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 PMF1Q6P1K2 205 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 CENPLQ8N0S6 344 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 STAG3L4Q8TBR4 150 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 NDRG1Q92597 394 aaKnown RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 LENG1Q96BZ8 264 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 OLFM1Q99784 485 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 COQ7Q99807 217 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 RAD21L1Q9H4I0 556 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 ZDHHC6Q9H6R6 413 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 SNX15Q9NRS6 342 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 ADAM28Q9UKQ2 775 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 PLLPQ9Y342 182 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 ZNF142P52746 1687 aaPredicted RBP15.14■□□□□ 0.01
NPHP4-201ENST00000378156 ZBTB14O43829 449 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 PAGE1O75459 146 aa15.14■□□□□ 0.01
NPHP4-201ENST00000378156 CCDC166P0CW27 439 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms