RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 COPG1Q9Y678 874 aaKnown RBP11.06□□□□□ -0.64
BEST1-201ENST00000378043 SCN10AQ9Y5Y9 1956 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 CTSHP09668 335 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 ARSAP15289 507 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 ALDH1A3P47895 512 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 ZNF789Q5FWF6 425 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 NOMO2Q5JPE7 1267 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 NXNQ6DKJ4 435 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 ZNF470Q6ECI4 717 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 POTEHQ6S545 545 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 C16orf89Q6UX73 402 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 BNC2Q6ZN30 1099 aaPredicted RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 CCNYL1Q8N7R7 359 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 HASPINQ8TF76 798 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 HEXDCQ8WVB3 486 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 CASP10Q92851 521 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 SGF29Q96ES7 293 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 FCRL2Q96LA5 508 aaPredicted RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 TSNARE1Q96NA8 513 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 GBP5Q96PP8 586 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 HAPLN3Q96S86 360 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 KATNAL1Q9BW62 490 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 AP5M1Q9H0R1 490 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 MRPL46Q9H2W6 279 aaKnown RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 TNFRSF12AQ9NP84 129 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 DMAP1Q9NPF5 467 aaPredicted RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 NUDT5Q9UKK9 219 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 SLCO1B7G3V0H7 640 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 SDHDO14521 159 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 B3GAT3O94766 335 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 KCNA5P22460 613 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 ADSLP30566 484 aaPredicted RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 RPL9P32969 192 aaKnown RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 CYP2C18P33260 490 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 MRPS22P82650 360 aaKnown RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 GRAMD1BQ3KR37 738 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 MMEL1Q495T6 779 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 RBM20Q5T481 1227 aaKnown RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 CNSTQ6PJW8 725 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 UGT2A3Q6UWM9 527 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 CCDC117Q8IWD4 279 aaPredicted RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 PGAM4Q8N0Y7 254 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 LILRA2Q8N149 483 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 PPHLN1Q8NEY8 458 aaKnown RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 PDCD6IPQ8WUM4 868 aaKnown RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 USP13Q92995 863 aaPredicted RBP11.05□□□□□ -0.64
BEST1-201ENST00000378043 GCNAQ96QF7 691 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 IGSF5Q9NSI5 407 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 RBM22Q9NW64 420 aaKnown RBP eCLIP11.05□□□□□ -0.64
BEST1-201ENST00000378043 FBXO5Q9UKT4 447 aa11.05□□□□□ -0.64
BEST1-201ENST00000378043 POMCP01189 267 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 ITGB1P05556 798 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 ENO3P13929 434 aaPredicted RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 HNRNPLP14866 589 aaKnown RBP eCLIP11.04□□□□□ -0.64
BEST1-201ENST00000378043 POLD2P49005 469 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 FOLH1Q04609 750 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 FLOT2Q14254 428 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 HERC3Q15034 1050 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 TLR1Q15399 786 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 LIN52Q52LA3 116 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 FAM219BQ5XKK7 198 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 AFMIDQ63HM1 303 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 TRIM67Q6ZTA4 783 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 BEND5Q7L4P6 421 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 C14orf80Q86SX3 495 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 HMGCLL1Q8TB92 370 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 ELMO2Q96JJ3 720 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 BTBD9Q96Q07 612 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 SERPINI1Q99574 410 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 OLFM1Q99784 485 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 SENP6Q9GZR1 1112 aaPredicted RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 WDR41Q9HAD4 459 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 ENTPD7Q9NQZ7 604 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 MPP6Q9NZW5 540 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 C6orf203Q9P0P8 240 aaPredicted RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 RIMS3Q9UJD0 308 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 GIT1Q9Y2X7 761 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 TRPV2Q9Y5S1 764 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 MYO16Q9Y6X6 1858 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 GLTPD2A6NH11 291 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 F8W810 466 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 CFLARO15519 480 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 NPHS1O60500 1241 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 MGEA5O60502 916 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 TADA2AO75478 443 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 CYP11A1P05108 521 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 ODC1P11926 461 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 CD151P48509 253 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 GEMP55040 296 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 POLE2P56282 527 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 IHHQ14623 411 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 PDK3Q15120 406 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 BRMS1LQ5PSV4 323 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 SH2D4BQ5SQS7 431 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 KIAA0930Q6ICG6 404 aaPredicted RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 RPS27LQ71UM5 84 aaKnown RBP11.04□□□□□ -0.64
BEST1-201ENST00000378043 SCD5Q86SK9 330 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 PELI3Q8N2H9 469 aa11.04□□□□□ -0.64
BEST1-201ENST00000378043 PTCD2Q8WV60 388 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms