RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 C1QTNF8P60827 252 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 TRIM16LQ309B1 348 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 ANO4Q32M45 955 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 DCLRE1AQ6PJP8 1040 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 ERMP1Q7Z2K6 904 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 PIGZQ86VD9 579 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 TNIP2Q8NFZ5 429 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 FAM149B1Q96BN6 582 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 POMKQ9H5K3 350 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 PDZD7Q9H5P4 517 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 UTP6Q9NYH9 597 aaKnown RBP16.03■□□□□ 0.16
CKAP4-201ENST00000378026 FADS3Q9Y5Q0 445 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 DPYSL4O14531 572 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 NCAM1P13591 858 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 ACADVLP49748 655 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 SEPT6Q14141 434 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 SLC7A5P1Q8MH63 180 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 CENPLQ8N0S6 344 aaPredicted RBP16.03■□□□□ 0.16
CKAP4-201ENST00000378026 OR2T34Q8NGX1 318 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 OR2T3Q8NH03 318 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 SPPL2BQ8TCT7 592 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 MAGEE2Q8TD90 523 aaPredicted RBP16.03■□□□□ 0.16
CKAP4-201ENST00000378026 ISL2Q96A47 359 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 ACDQ96AP0 544 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 C1QTNF1Q9BXJ1 281 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 DGKBQ9Y6T7 804 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 FAM155AB1AL88 458 aaPredicted RBP16.03■□□□□ 0.16
CKAP4-201ENST00000378026 EI24O14681 340 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 ALDH2P05091 517 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 SNRPB2P08579 225 aaKnown RBP16.03■□□□□ 0.16
CKAP4-201ENST00000378026 INHBBP09529 407 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 SLC35E2BP0CK96 405 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 MYF6P23409 242 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 PITX1P78337 314 aaPredicted RBP16.03■□□□□ 0.16
CKAP4-201ENST00000378026 TNK2Q07912 1038 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 NFATC3Q12968 1075 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 TARBP2Q15633 366 aaKnown RBP16.03■□□□□ 0.16
CKAP4-201ENST00000378026 MOGQ16653 247 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 BTLAQ7Z6A9 289 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 FAM35AQ86V20 835 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 DENND6AQ8IWF6 608 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 ANKFN1Q8N957 763 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 SLX1AQ9BQ83 275 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 MRPL40Q9NQ50 206 aaKnown RBP16.03■□□□□ 0.16
CKAP4-201ENST00000378026 ST14Q9Y5Y6 855 aa16.03■□□□□ 0.16
CKAP4-201ENST00000378026 TRPC5OSA6NMA1 111 aa16.02■□□□□ 0.16
CKAP4-201ENST00000378026 HSPA8P11142 646 aaKnown RBP16.02■□□□□ 0.16
CKAP4-201ENST00000378026 CLCN3P51790 818 aa16.02■□□□□ 0.16
CKAP4-201ENST00000378026 BFSP2Q13515 415 aa16.02■□□□□ 0.16
CKAP4-201ENST00000378026 CAPRIN1Q14444 709 aaKnown RBP16.02■□□□□ 0.16
CKAP4-201ENST00000378026 HSDL1Q3SXM5 330 aa16.02■□□□□ 0.16
CKAP4-201ENST00000378026 SAMD4BQ5PRF9 694 aaKnown RBP16.02■□□□□ 0.16
CKAP4-201ENST00000378026 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.16
CKAP4-201ENST00000378026 TAMM41Q96BW9 452 aa16.02■□□□□ 0.16
CKAP4-201ENST00000378026 MRPL45Q9BRJ2 306 aaKnown RBP16.02■□□□□ 0.16
CKAP4-201ENST00000378026 TUBA8Q9NY65 449 aaPredicted RBP16.02■□□□□ 0.16
CKAP4-201ENST00000378026 DAPK2Q9UIK4 370 aa16.02■□□□□ 0.16
CKAP4-201ENST00000378026 NRP2O60462 931 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 BCL10O95999 233 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 IQCF3P0C7M6 154 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 CCNA2P20248 432 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 DCKP27707 260 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 OXTRP30559 389 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 POLR2IP36954 125 aaKnown RBP16.02■□□□□ 0.15
CKAP4-201ENST00000378026 YBX1P67809 324 aaKnown RBP16.02■□□□□ 0.15
CKAP4-201ENST00000378026 MPP1Q00013 466 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 ZIK1Q3SY52 487 aaPredicted RBP16.02■□□□□ 0.15
CKAP4-201ENST00000378026 TSTD2Q5T7W7 516 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 NIPAL1Q6NVV3 410 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 TMEM135Q86UB9 458 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 CEP97Q8IW35 865 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 TMCO5AQ8N6Q1 288 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 PNPLA1Q8N8W4 532 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 TXNDC5Q8NBS9 432 aaKnown RBP16.02■□□□□ 0.15
CKAP4-201ENST00000378026 CHPT1Q8WUD6 406 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 STYXQ8WUJ0 223 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 PHF21BQ96EK2 531 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 CD300AQ9UGN4 299 aa16.02■□□□□ 0.15
CKAP4-201ENST00000378026 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.15
CKAP4-201ENST00000378026 BPTFQ12830 3046 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 DHRS12A0PJE2 317 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 APOA4P06727 396 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 BMP2P12643 396 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 UBA1P22314 1058 aaKnown RBP16.01■□□□□ 0.15
CKAP4-201ENST00000378026 MLLT10P55197 1068 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 TRAP1Q12931 704 aaKnown RBP16.01■□□□□ 0.15
CKAP4-201ENST00000378026 STXBP2Q15833 593 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 CLEC6AQ6EIG7 209 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 ANKRD52Q8NB46 1076 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 SLC45A3Q96JT2 553 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 OSBPL2Q9H1P3 480 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 FANCEQ9HB96 536 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 EIF2B3Q9NR50 452 aaKnown RBP16.01■□□□□ 0.15
CKAP4-201ENST00000378026 CHST12Q9NRB3 414 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 ACOT9Q9Y305 439 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 ZBTB24O43167 697 aaPredicted RBP16.01■□□□□ 0.15
CKAP4-201ENST00000378026 GJA9P57773 515 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 SLC12A1Q13621 1099 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 IER5Q5VY09 327 aa16.01■□□□□ 0.15
CKAP4-201ENST00000378026 IGFN1Q86VF2 1251 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms