RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 POU5F2Q8N7G0 328 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 MID1IP1Q9NPA3 183 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 IGSF9Q9P2J2 1179 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 C1orf232A0A0U1RR37 186 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 A0A1B0GVM2 712 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 TCAF2A6NFQ2 919 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 GRIA1P42261 906 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 PPP3CCP48454 512 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 GATMP50440 423 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 IL2P60568 153 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 N4BP2L2Q92802 583 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 ACTR8Q9H981 624 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 LGALS13Q9UHV8 139 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 TLR6Q9Y2C9 796 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 TBC1D3BA6NDS4 549 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 UBDO15205 165 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 DCXO43602 365 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 SYNCRIPO60506 623 aaKnown RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 HNRNPH1P31943 449 aaKnown RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 GPR15P49685 360 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 PITX1P78337 314 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 KLF1Q13351 362 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 CYLC2Q14093 348 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 LINGO4Q6UY18 593 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 TMEM174Q8WUU8 243 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 CATSPER2Q96P56 530 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 KCNK4Q9NYG8 393 aa14.65□□□□□ -0.06
TCOF1-202ENST00000377797 ZFP37Q9Y6Q3 630 aaPredicted RBP14.65□□□□□ -0.06
TCOF1-202ENST00000377797 ENPP3O14638 875 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 KRT16P08779 473 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 MSH3P20585 1137 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 QPCTQ16769 361 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 AGKQ53H12 422 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 XPR1Q9UBH6 696 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 CPQQ9Y646 472 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 SQORQ9Y6N5 450 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 C9IYK1 514 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 CLTBP09497 229 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 NDST2P52849 883 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 PLIN5Q00G26 463 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 SLC9A4Q6AI14 798 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 FAM45BPQ6NSW5 357 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 TTC7BQ86TV6 843 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 PQLC3Q8N755 202 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 FAM45AQ8TCE6 357 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 KBTBD7Q8WVZ9 684 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 OSBPL2Q9H1P3 480 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 VTI1BQ9UEU0 232 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 TUBGCP6Q96RT7 1819 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 RREB1Q92766 1687 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 EIF4E1BA6NMX2 242 aaKnown RBP14.64□□□□□ -0.07
TCOF1-202ENST00000377797 CCL16O15467 120 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 EDF1O60869 148 aaKnown RBP14.64□□□□□ -0.07
TCOF1-202ENST00000377797 PFKFB4Q16877 469 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 ICE2Q659A1 982 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 ARCQ7LC44 396 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 TDRPQ86YL5 185 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 CYP4X1Q8N118 509 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 PXYLP1Q8TE99 480 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 AUTS2Q8WXX7 1259 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 TMEM209Q96SK2 561 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 SPATA16Q9BXB7 569 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 MAGEH1Q9H213 219 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 PCDH8O95206 1070 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 CES1P23141 567 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 TTPAP49638 278 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 PPIGQ13427 754 aaKnown RBP eCLIP14.64□□□□□ -0.072e-7■■□□□ 13.8
TCOF1-202ENST00000377797 TRIP10Q15642 601 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 TRIM60Q495X7 471 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 FNDC3BQ53EP0 1204 aaKnown RBP14.64□□□□□ -0.07
TCOF1-202ENST00000377797 UBXN11Q5T124 520 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 STXBP5Q5T5C0 1151 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 AFTPHQ6ULP2 937 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 SCUBE1Q8IWY4 988 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 ICA1LQ8NDH6 482 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 VWA7Q9Y334 891 aa14.64□□□□□ -0.07
TCOF1-202ENST00000377797 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 RAD51BO15315 384 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 CCNT2O60583 730 aaKnown RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 ATP5F1P24539 256 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 MZF1P28698 734 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 MAPKAPK2P49137 400 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 CXCR3P49682 368 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 MLLT6P55198 1093 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 PPIDQ08752 370 aaKnown RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 GPR17Q13304 367 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 FLOT2Q14254 428 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 OR52K2Q8NGK3 314 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 OR4L1Q8NH43 312 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 CEP70Q8NHQ1 597 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 ERLEC1Q96DZ1 483 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 ACOX2Q99424 681 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 GKN1Q9NS71 199 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 NDST3O95803 873 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 EEF1B2P24534 225 aaKnown RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 RPS24P62847 133 aaKnown RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 STAG3L4Q8TBR4 150 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 CCSER2Q9H7U1 834 aa14.63□□□□□ -0.07
TCOF1-202ENST00000377797 KIAA1522Q9P206 1035 aaPredicted RBP14.63□□□□□ -0.07
TCOF1-202ENST00000377797 ZNF212Q9UDV6 495 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms