RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TMEM259Q4ZIN3 620 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 AFMIDQ63HM1 303 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 GDPD4Q6W3E5 623 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 GLRX5Q86SX6 157 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 TMEM145Q8NBT3 493 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 BAHD1Q8TBE0 780 aaPredicted RBP17.06■□□□□ 0.32
HMGN4-201ENST00000377575 RHBDD1Q8TEB9 315 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 CTNNBL1Q8WYA6 563 aaPredicted RBP17.06■□□□□ 0.32
HMGN4-201ENST00000377575 FEM1CQ96JP0 617 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 BTBD6Q96KE9 485 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 KLHL32Q96NJ5 620 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 SLC39A8Q9C0K1 460 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 ERVMER34-1Q9H9K5 563 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 SP110Q9HB58 689 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 CWC15Q9P013 229 aaKnown RBP17.06■□□□□ 0.32
HMGN4-201ENST00000377575 UVRAGQ9P2Y5 699 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 LCMT1Q9UIC8 334 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 NENFQ9UMX5 172 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 ZFR2Q9UPR6 939 aaKnown RBP17.06■□□□□ 0.32
HMGN4-201ENST00000377575 MFHAS1Q9Y4C4 1052 aa17.06■□□□□ 0.32
HMGN4-201ENST00000377575 ACACBO00763 2458 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 DFFAO00273 331 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 TSPAN6O43657 245 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 MFAP3LO75121 409 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 SLC25A11Q02978 314 aaKnown RBP17.05■□□□□ 0.32
HMGN4-201ENST00000377575 SEL1L3Q68CR1 1132 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 ARHGAP12Q8IWW6 846 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 NPWQ8N729 165 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 FAM174AQ8TBP5 190 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 KLK6Q92876 244 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 KLHDC7BQ96G42 594 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 EXOC2Q96KP1 924 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 CNTNAP3BQ96NU0 1288 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 MYOCQ99972 504 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 CNTNAP3Q9BZ76 1288 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 CPEB1Q9BZB8 566 aaKnown RBP17.05■□□□□ 0.32
HMGN4-201ENST00000377575 ABHD10Q9NUJ1 306 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 CTTNBP2NLQ9P2B4 639 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 LHX3Q9UBR4 397 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 APOBEC2Q9Y235 224 aaKnown RBP17.05■□□□□ 0.32
HMGN4-201ENST00000377575 SHROOM3Q8TF72 1996 aa17.05■□□□□ 0.32
HMGN4-201ENST00000377575 TPRP12270 2363 aaKnown RBP17.04■□□□□ 0.32
HMGN4-201ENST00000377575 CHD8Q9HCK8 2581 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 J3KR12 359 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 AKR1B10O60218 316 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 PALMO75781 387 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 H2AFZP0C0S5 128 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 FTH1P19P0C7X4 201 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 RARAP10276 462 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 TCF4P15884 667 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 SERPINB6P35237 376 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 ABL2P42684 1182 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 SSR1P43307 286 aaKnown RBP17.04■□□□□ 0.32
HMGN4-201ENST00000377575 IL10RBQ08334 325 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 KRT81Q14533 505 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 RFTN1Q14699 578 aaPredicted RBP17.04■□□□□ 0.32
HMGN4-201ENST00000377575 CYTH1Q15438 398 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 HADHQ16836 314 aaKnown RBP17.04■□□□□ 0.32
HMGN4-201ENST00000377575 TMCO3Q6UWJ1 677 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 H2AFVQ71UI9 128 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 POLNQ7Z5Q5 900 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 CNGA4Q8IV77 575 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 CINPQ9BW66 212 aaPredicted RBP17.04■□□□□ 0.32
HMGN4-201ENST00000377575 SLC17A9Q9BYT1 436 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 FZD3Q9NPG1 666 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 DKK3Q9UBP4 350 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 CA5BQ9Y2D0 317 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 BTBD3Q9Y2F9 522 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 CEP295Q9C0D2 2601 aa17.04■□□□□ 0.32
HMGN4-201ENST00000377575 A6NNZ2 444 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 ITGAVP06756 1048 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 THEGLP0DJG4 465 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 XPAP23025 273 aaPredicted RBP17.03■□□□□ 0.32
HMGN4-201ENST00000377575 EPHA8P29322 1005 aaPredicted RBP17.03■□□□□ 0.32
HMGN4-201ENST00000377575 SUOXP51687 545 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 SGCGQ13326 291 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 CFAP58Q5T655 872 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 TTC7BQ86TV6 843 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 SPATS2Q86XZ4 545 aaKnown RBP17.03■□□□□ 0.32
HMGN4-201ENST00000377575 NETO2Q8NC67 525 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 CSPG4P5Q96PW8 444 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 TUBGCP5Q96RT8 1024 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 RCOR3Q9P2K3 495 aaPredicted RBP17.03■□□□□ 0.32
HMGN4-201ENST00000377575 FTSJ1Q9UET6 329 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 WASF3Q9UPY6 502 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 LRRK1Q38SD2 2015 aa17.03■□□□□ 0.32
HMGN4-201ENST00000377575 PIGNO95427 931 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 RXRGP48443 463 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 CDH6P55285 790 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 ASTE1Q2TB18 679 aaPredicted RBP17.02■□□□□ 0.32
HMGN4-201ENST00000377575 PRAMEF14Q5SWL7 426 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 SARM1Q6SZW1 724 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 KYAT3Q6YP21 454 aaKnown RBP17.02■□□□□ 0.32
HMGN4-201ENST00000377575 GCNT7Q6ZNI0 430 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 PTAR1Q7Z6K3 402 aaPredicted RBP17.02■□□□□ 0.32
HMGN4-201ENST00000377575 ABI3BPQ7Z7G0 1075 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 DENND6BQ8NEG7 585 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 HCAR2Q8TDS4 363 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 CXorf40AQ8TE69 158 aa17.02■□□□□ 0.32
HMGN4-201ENST00000377575 SAP25Q8TEE9 199 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms