RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SGSM3Q96HU1 749 aa12.75□□□□□ -0.37
CLCN6-206ENST00000376496 SEC16BQ96JE7 1060 aa12.75□□□□□ -0.37
CLCN6-206ENST00000376496 CINPQ9BW66 212 aaPredicted RBP12.75□□□□□ -0.37
CLCN6-206ENST00000376496 POLR1EQ9GZS1 481 aaKnown RBP12.75□□□□□ -0.37
CLCN6-206ENST00000376496 TXNDC16Q9P2K2 825 aa12.75□□□□□ -0.37
CLCN6-206ENST00000376496 GGT7Q9UJ14 662 aa12.75□□□□□ -0.37
CLCN6-206ENST00000376496 VPS28Q9UK41 221 aa12.75□□□□□ -0.37
CLCN6-206ENST00000376496 MTO1Q9Y2Z2 717 aaKnown RBP12.75□□□□□ -0.37
CLCN6-206ENST00000376496 ASB3Q9Y575 518 aa12.75□□□□□ -0.37
CLCN6-206ENST00000376496 TRANK1O15050 2925 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 TRAV19A0A0A6YYK7 116 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 HGSO14964 777 aaPredicted RBP12.74□□□□□ -0.37
CLCN6-206ENST00000376496 CD160O95971 181 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 SP100P23497 879 aaPredicted RBP12.74□□□□□ -0.37
CLCN6-206ENST00000376496 NEK3P51956 506 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 MPP1Q00013 466 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 PDE1BQ01064 536 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 SLC18A2Q05940 514 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 CDH18Q13634 790 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 CYTH1Q15438 398 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 TDRD5Q8NAT2 981 aaKnown RBP12.74□□□□□ -0.37
CLCN6-206ENST00000376496 PPHLN1Q8NEY8 458 aaKnown RBP12.74□□□□□ -0.37
CLCN6-206ENST00000376496 OR6K2Q8NGY2 324 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 CCDC134Q9H6E4 229 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 ZNF358Q9NW07 568 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 CHKBQ9Y259 395 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 TBC1D30Q9Y2I9 924 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 FCF1Q9Y324 198 aaKnown RBP12.74□□□□□ -0.37
CLCN6-206ENST00000376496 TCAF1Q9Y4C2 921 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 PCDHGC4Q9Y5F7 938 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 IRAK3Q9Y616 596 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 ILVBLA1L0T0 632 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 OR51F1A6NGY5 319 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 AURKAO14965 403 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 MOSPD3O75425 235 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 ATXN1LP0C7T5 689 aaKnown RBP12.74□□□□□ -0.37
CLCN6-206ENST00000376496 LGSNQ5TDP6 509 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 GRASPQ7Z6J2 395 aaPredicted RBP12.74□□□□□ -0.37
CLCN6-206ENST00000376496 LDB1Q86U70 411 aaPredicted RBP12.74□□□□□ -0.37
CLCN6-206ENST00000376496 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 BLOC1S5Q8TDH9 187 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 SH3RF2Q8TEC5 729 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 MAGEB18Q96M61 343 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 ZSWIM3Q96MP5 696 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 GCNAQ96QF7 691 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 CDH22Q9UJ99 828 aa12.74□□□□□ -0.37
CLCN6-206ENST00000376496 NOTCH4Q99466 2003 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 GBF1Q92538 1859 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 CARNS1A5YM72 827 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 LUC7L3O95232 432 aaKnown RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 PRAMEF12O95522 483 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 RHOP08100 348 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 SERPINH1P50454 418 aaKnown RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 ATXN7L2Q5T6C5 722 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 CGB2Q6NT52 195 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 MFN1Q8IWA4 741 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 GPR65Q8IYL9 337 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 CMTM8Q8IZV2 173 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 DCLK2Q8N568 766 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 PHOSPHO2Q8TCD6 241 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 PDCD6IPQ8WUM4 868 aaKnown RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 MYLIPQ8WY64 445 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 FEM1AQ9BSK4 669 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 ACE2Q9BYF1 805 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 SUDS3Q9H7L9 328 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 YBX2Q9Y2T7 364 aaKnown RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 EBAG9O00559 213 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 CLASP2O75122 1294 aaKnown RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 ZWINTO95229 277 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 PDHA1P08559 390 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 GABRB3P28472 473 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 GP5P40197 560 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 ARSDP51689 593 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 ACBD5Q5T8D3 534 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 CYS1Q717R9 158 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 CHST9Q7L1S5 443 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 HJURPQ8NCD3 748 aaPredicted RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 APOL5Q9BWW9 433 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 TM6SF2Q9BZW4 377 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 VPS11Q9H270 941 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 STOML2Q9UJZ1 356 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 LSM7Q9UK45 103 aaKnown RBP12.73□□□□□ -0.37
CLCN6-206ENST00000376496 ARL5AQ9Y689 179 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 XIRP2A4UGR9 3374 aa12.73□□□□□ -0.37
CLCN6-206ENST00000376496 TMCC1O94876 653 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 CDC25CP30307 473 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 AVPR1AP37288 418 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 IFT88Q13099 833 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 MTA1Q13330 715 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 MSLNQ13421 630 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 PDE1CQ14123 709 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 FSTL4Q6MZW2 842 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 SETD3Q86TU7 594 aaPredicted RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 UNKQ9C0B0 810 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 IQCGQ9H095 443 aaKnown RBP12.72□□□□□ -0.37
CLCN6-206ENST00000376496 LINC00597Q9H2U6 94 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 SEPT3Q9UH03 358 aa12.72□□□□□ -0.37
CLCN6-206ENST00000376496 VPS51Q9UID3 782 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms