RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 OR2AP1Q8NGE2 309 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 MAPK15Q8TD08 544 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 ASB12Q8WXK4 309 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 CENPIQ92674 756 aaPredicted RBP15.17■□□□□ 0.02
CLCN6-204ENST00000376491 RAB7BQ96AH8 199 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 CENPTQ96BT3 561 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 NAF1Q96HR8 494 aaKnown RBP15.17■□□□□ 0.02
CLCN6-204ENST00000376491 HIC2Q96JB3 615 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 ZNF578Q96N58 590 aaPredicted RBP15.17■□□□□ 0.02
CLCN6-204ENST00000376491 KLHL32Q96NJ5 620 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 DEPDC7Q96QD5 511 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 PCDHB18PQ96TA0 734 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 MAGEH1Q9H213 219 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 TCEAL2Q9H3H9 227 aaPredicted RBP15.17■□□□□ 0.02
CLCN6-204ENST00000376491 NOL6Q9H6R4 1146 aaKnown RBP15.17■□□□□ 0.02
CLCN6-204ENST00000376491 USP29Q9HBJ7 922 aa15.17■□□□□ 0.02
CLCN6-204ENST00000376491 IPO11Q9UI26 975 aaKnown RBP15.17■□□□□ 0.02
CLCN6-204ENST00000376491 MGAQ8IWI9 3026 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 A0A1W2PNU3 283 aaPredicted RBP15.16■□□□□ 0.02
CLCN6-204ENST00000376491 CPED1A4D0V7 1026 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 H3BM21 787 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 KRIT1O00522 736 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 CASC3O15234 703 aaKnown RBP15.16■□□□□ 0.02
CLCN6-204ENST00000376491 AQP9O43315 295 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 KDELR3O43731 214 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 LZTS3O60299 673 aaPredicted RBP15.16■□□□□ 0.02
CLCN6-204ENST00000376491 DXOO77932 396 aaKnown RBP15.16■□□□□ 0.02
CLCN6-204ENST00000376491 PLEKP08567 350 aaPredicted RBP15.16■□□□□ 0.02
CLCN6-204ENST00000376491 UNGP13051 313 aaPredicted RBP15.16■□□□□ 0.02
CLCN6-204ENST00000376491 ITIH2P19823 946 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 EEF1GP26641 437 aaKnown RBP15.16■□□□□ 0.02
CLCN6-204ENST00000376491 IGFALSP35858 605 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 PTPN9P43378 593 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 LSSP48449 732 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 JAM2P57087 298 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 POLR2FP61218 127 aaKnown RBP15.16■□□□□ 0.02
CLCN6-204ENST00000376491 SNRPD1P62314 119 aaKnown RBP15.16■□□□□ 0.02
CLCN6-204ENST00000376491 CXADRP78310 365 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 C19orf57Q0VDD7 668 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 ISXQ2M1V0 245 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 ARL13BQ3SXY8 428 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 LRRC73Q5JTD7 316 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 ZNF248Q8NDW4 579 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 LMX1AQ8TE12 382 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 TBC1D31Q96DN5 1066 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 LGMNQ99538 433 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 KLC2Q9H0B6 622 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 ABCG4Q9H172 646 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 VPS16Q9H269 839 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 RETREG1Q9H6L5 497 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 ASCL3Q9NQ33 180 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 DACH1Q9UI36 760 aa15.16■□□□□ 0.02
CLCN6-204ENST00000376491 GCN1Q92616 2671 aaKnown RBP15.15■□□□□ 0.02
CLCN6-204ENST00000376491 TEX51A0A1B0GUA7 166 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 EME2A4GXA9 379 aaPredicted RBP15.15■□□□□ 0.02
CLCN6-204ENST00000376491 NEMP1O14524 444 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 RAMP2O60895 175 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 GCATO75600 419 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 POP4O95707 220 aaKnown RBP15.15■□□□□ 0.02
CLCN6-204ENST00000376491 RFC1P35251 1148 aaPredicted RBP15.15■□□□□ 0.02
CLCN6-204ENST00000376491 SOX5P35711 763 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 GEMIN4P57678 1058 aaKnown RBP15.15■□□□□ 0.02
CLCN6-204ENST00000376491 PCBP4P57723 403 aaKnown RBP15.15■□□□□ 0.02
CLCN6-204ENST00000376491 C1QBPQ07021 282 aaKnown RBP15.15■□□□□ 0.02
CLCN6-204ENST00000376491 POLD3Q15054 466 aaPredicted RBP15.15■□□□□ 0.02
CLCN6-204ENST00000376491 PERM1Q5SV97 790 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 CRTC1Q6UUV9 634 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 EFL1Q7Z2Z2 1120 aaKnown RBP15.15■□□□□ 0.02
CLCN6-204ENST00000376491 LSMEM2Q8N112 164 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 PYROXD2Q8N2H3 581 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 FAM172AQ8WUF8 416 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 POLR1BQ9H9Y6 1135 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 NLRC4Q9NPP4 1024 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 EVA1BQ9NVM1 165 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 SALL4Q9UJQ4 1053 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 HPCAL4Q9UM19 191 aa15.15■□□□□ 0.02
CLCN6-204ENST00000376491 TPP1O14773 563 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 MMP20O60882 483 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 TMCC1O94876 653 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 ZIC2O95409 532 aaPredicted RBP15.14■□□□□ 0.01
CLCN6-204ENST00000376491 GSCP56915 257 aaPredicted RBP15.14■□□□□ 0.01
CLCN6-204ENST00000376491 C1orf61Q13536 156 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 KRT31Q15323 416 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 WDR59Q6PJI9 974 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 GDPD4Q6W3E5 623 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 TTC7BQ86TV6 843 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 VPS36Q86VN1 386 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 LSM14AQ8ND56 463 aaKnown RBP15.14■□□□□ 0.01
CLCN6-204ENST00000376491 NTAN1Q96AB6 310 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 IL12RB2Q99665 862 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 BOCQ9BWV1 1114 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 OSBPL1AQ9BXW6 950 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 NUP62CLQ9H1M0 184 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 MBNL1Q9NR56 388 aaKnown RBP15.14■□□□□ 0.01
CLCN6-204ENST00000376491 FAM207AQ9NSI2 230 aaPredicted RBP15.14■□□□□ 0.01
CLCN6-204ENST00000376491 CHMP5Q9NZZ3 219 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 SPASTQ9UBP0 616 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 SATB2Q9UPW6 733 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 ENTPD2Q9Y5L3 495 aa15.14■□□□□ 0.01
CLCN6-204ENST00000376491 LRP4O75096 1905 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms