RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 MT-CYBP00156 380 aaPredicted RBP23.2■■□□□ 1.3
HLA-C-202ENST00000376237 MMP2P08253 660 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 CA4P22748 312 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 STARD6P59095 220 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 MYLK3Q32MK0 819 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 HSF5Q4G112 596 aaPredicted RBP23.2■■□□□ 1.3
HLA-C-202ENST00000376237 ATXN7L2Q5T6C5 722 aaPredicted RBP23.2■■□□□ 1.3
HLA-C-202ENST00000376237 EMC10Q5UCC4 262 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 SDE2Q6IQ49 451 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 Q6ZVU0 165 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 PDCD7Q8N8D1 485 aaKnown RBP23.2■■□□□ 1.3
HLA-C-202ENST00000376237 OR2A12Q8NGT7 310 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 IFT81Q8WYA0 676 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 PTPRN2Q92932 1015 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 ART4Q93070 314 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 TUBGCP5Q96RT8 1024 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 MLPHQ9BV36 600 aaPredicted RBP23.2■■□□□ 1.3
HLA-C-202ENST00000376237 CPEB1Q9BZB8 566 aaKnown RBP23.2■■□□□ 1.3
HLA-C-202ENST00000376237 EPC1Q9H2F5 836 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 STON1Q9Y6Q2 735 aa23.2■■□□□ 1.3
HLA-C-202ENST00000376237 WASH3PC4AMC7 463 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 SUN1O94901 812 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 EPOP01588 193 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 TNFRSF8P28908 595 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 IL12RB1P42701 662 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 TNNT3P45378 269 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-202ENST00000376237 CCNHP51946 323 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-202ENST00000376237 CCINQ13939 588 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 TRADDQ15628 312 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 TJAP1Q5JTD0 557 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 PPP1R21Q6ZMI0 780 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 DPY19L3Q6ZPD9 716 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 LINC00523Q86TU6 105 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 RYBPQ8N488 228 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-202ENST00000376237 MCUQ8NE86 351 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.19■■□□□ 1.3
HLA-C-202ENST00000376237 LRIG1Q96JA1 1093 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 UBP1Q9NZI7 540 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 ARIH1Q9Y4X5 557 aaPredicted RBP23.19■■□□□ 1.3
HLA-C-202ENST00000376237 MIA3Q5JRA6 1907 aa23.19■■□□□ 1.3
HLA-C-202ENST00000376237 AP3B1O00203 1094 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 NTSR1P30989 418 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 TIE1P35590 1138 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 TERF1P54274 439 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 PLTPP55058 493 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 HLTFQ14527 1009 aaKnown RBP eCLIP23.18■■□□□ 1.3
HLA-C-202ENST00000376237 NAPEPLDQ6IQ20 393 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 KDELC1Q6UW63 502 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 SYNPOQ8N3V7 929 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 HEPHQ9BQS7 1158 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 FSD1LQ9BXM9 530 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 FOXP3Q9BZS1 431 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 ATP13A3Q9H7F0 1226 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 CACNA2D2Q9NY47 1150 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 EVLQ9UI08 416 aaPredicted RBP23.18■■□□□ 1.3
HLA-C-202ENST00000376237 COL6A3P12111 3177 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 TTC24A2A3L6 582 aaPredicted RBP23.18■■□□□ 1.3
HLA-C-202ENST00000376237 KRBA1A5PL33 1030 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 TP73O15350 636 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 BNIP3LO60238 219 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 SOCS5O75159 536 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 PMPCBO75439 489 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 CD72P21854 359 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 CARSP49589 748 aaKnown RBP23.18■■□□□ 1.3
HLA-C-202ENST00000376237 SEC13P55735 322 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 WNT3AP56704 352 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 BCL2L1Q07817 233 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 PRCCQ92733 491 aaPredicted RBP23.18■■□□□ 1.3
HLA-C-202ENST00000376237 ACOX2Q99424 681 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 MUTYHQ9UIF7 546 aa23.18■■□□□ 1.3
HLA-C-202ENST00000376237 NDRG2Q9UN36 371 aaKnown RBP23.18■■□□□ 1.3
HLA-C-202ENST00000376237 F5P12259 2224 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 KANSL1LA0AUZ9 987 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 ALOX15BO15296 676 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 GJB3O75712 270 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 EPHX1P07099 455 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 CHRM1P11229 460 aaPredicted RBP23.17■■□□□ 1.3
HLA-C-202ENST00000376237 PRKCHP24723 683 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 SERPINA4P29622 427 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 LRRC32Q14392 662 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 ELAVL3Q14576 367 aaKnown RBP23.17■■□□□ 1.3
HLA-C-202ENST00000376237 ELF2Q15723 593 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 C2orf27AQ580R0 203 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 C9orf64Q5T6V5 341 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 ANKRD22Q5VYY1 191 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 ZDHHC24Q6UX98 284 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 IL17RCQ8NAC3 791 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 IPMKQ8NFU5 416 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 FBXO25Q8TCJ0 367 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 MRGPRX2Q96LB1 330 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 ZNF641Q96N77 438 aaPredicted RBP23.17■■□□□ 1.3
HLA-C-202ENST00000376237 PARD6BQ9BYG5 372 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 TSPYL1Q9H0U9 437 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 CD320Q9NPF0 282 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 ZDHHC18Q9NUE0 388 aa23.17■■□□□ 1.3
HLA-C-202ENST00000376237 MTRF1LQ9UGC7 380 aaKnown RBP23.17■■□□□ 1.3
HLA-C-202ENST00000376237 A0A1W2PQ67 120 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 TCRBV7S3A2A0A539 114 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 TMEM63AO94886 807 aa23.16■■□□□ 1.3
HLA-C-202ENST00000376237 MLNP12872 115 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms