RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 HOXC8P31273 242 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 TM4SF4P48230 202 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 CRYBB1P53674 252 aaPredicted RBP13.08□□□□□ -0.32
MSH5-204ENST00000375755 ESRRGP62508 458 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 PRAMEP78395 509 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 OR6B2Q6IFH4 312 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 CYS1Q717R9 158 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 NDRG1Q92597 394 aaKnown RBP13.08□□□□□ -0.32
MSH5-204ENST00000375755 ANKRD60Q9BZ19 345 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 MAGEB5Q9BZ81 275 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 PCDHAC1Q9H158 963 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 ASNSD1Q9NWL6 643 aa13.08□□□□□ -0.32
MSH5-204ENST00000375755 DUS2Q9NX74 493 aaKnown RBP13.08□□□□□ -0.32
MSH5-204ENST00000375755 KIAA1522Q9P206 1035 aaPredicted RBP13.08□□□□□ -0.32
MSH5-204ENST00000375755 A0A1W2PPW3 197 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 G3V2L1 256 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 F7P08709 466 aaPredicted RBP13.07□□□□□ -0.32
MSH5-204ENST00000375755 UGT1A6P19224 532 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 TPSB2P20231 275 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 UGT1A1P22309 533 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 UGT1A4P22310 534 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 UGT1A3P35503 534 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 UGT1A5P35504 534 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 TPSAB1Q15661 275 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 KYAT1Q16773 422 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 BEST2Q8NFU1 509 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 PCDH19Q8TAB3 1148 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 ZNF385DQ9H6B1 395 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 RPF2Q9H7B2 306 aaKnown RBP13.07□□□□□ -0.32
MSH5-204ENST00000375755 AGO3Q9H9G7 860 aaKnown RBP13.07□□□□□ -0.32
MSH5-204ENST00000375755 PLEKHA5Q9HAU0 1116 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 MIOSQ9NXC5 875 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 SPATA7Q9P0W8 599 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 GTF2IRD1Q9UHL9 959 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 ST3GAL5Q9UNP4 418 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 TRIM17Q9Y577 477 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 SNX13Q9Y5W8 968 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 TRIM64CA6NLI5 447 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 SOBPA7XYQ1 873 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 C9IYK1 514 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 H3BMQ9 156 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 ZNF701M0R085 212 aaPredicted RBP13.07□□□□□ -0.32
MSH5-204ENST00000375755 APOL1O14791 398 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 LTFP02788 710 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 CD300CQ08708 224 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 SREBF2Q12772 1141 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 HMBOX1Q6NT76 420 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 TMEM110Q86TL2 294 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 SLCO4A1Q96BD0 722 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 COG8Q96MW5 612 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 PAAF1Q9BRP4 392 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 SNX15Q9NRS6 342 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 C20orf96Q9NUD7 363 aaPredicted RBP13.07□□□□□ -0.32
MSH5-204ENST00000375755 TMED5Q9Y3A6 229 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 PIRO00625 290 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 TRIM38O00635 465 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 GSTT2P0CG29 244 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 GSTT2BP0CG30 244 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 CKMT2P17540 419 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 GJA9P57773 515 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 NHSL2Q5HYW2 709 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 FGD3Q5JSP0 725 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 LCLAT1Q6UWP7 414 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 ZBTB46Q86UZ6 589 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 CPSF7Q8N684 471 aaKnown RBP13.07□□□□□ -0.32
MSH5-204ENST00000375755 CDKL2Q92772 493 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 TANKQ92844 425 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 GATA5Q9BWX5 397 aaPredicted RBP13.07□□□□□ -0.32
MSH5-204ENST00000375755 EFCAB1Q9HAE3 211 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 ADA2Q9NZK5 511 aa13.07□□□□□ -0.32
MSH5-204ENST00000375755 A0A087WXM4 84 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 TCAF2A6NFQ2 919 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 J3QRK9 145 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 GIPC1O14908 333 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 ASGR1P07306 291 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 GNAO1P09471 354 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 ATXN1P54253 815 aaKnown RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 FCGRTP55899 365 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 PTK2BQ14289 1009 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 CCDC153Q494R4 210 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 AARS2Q5JTZ9 985 aaKnown RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 FBXO47Q5MNV8 452 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 C16orf87Q6PH81 154 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 OSTM1Q86WC4 334 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 ZNF786Q8N393 782 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 FBXL8Q96CD0 374 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 MCRS1Q96EZ8 462 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 ATXN7L3BQ96GX2 97 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 HEPHQ9BQS7 1158 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 KATNAL1Q9BW62 490 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 NOL11Q9H8H0 719 aaKnown RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 CXorf21Q9HAI6 301 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 TIMM13Q9Y5L4 95 aaPredicted RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 TMEM88BA6NKF7 163 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 KPNA7A9QM74 516 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 CLDN5O00501 218 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 TGM2P21980 687 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 CDH3P22223 829 aa13.06□□□□□ -0.32
MSH5-204ENST00000375755 ZNF143P52747 638 aaPredicted RBP13.06□□□□□ -0.32
MSH5-204ENST00000375755 SESN2P58004 480 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms