RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 ZNF276Q8N554 614 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 CNTD1Q8N815 330 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 PANX3Q96QZ0 392 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 BBS2Q9BXC9 721 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 ABHD16BQ9H3Z7 469 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 SCUBE2Q9NQ36 999 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 BTRCQ9Y297 605 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 C5orf58C9J3I9 102 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 SNAP91O60641 907 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 PIGRP01833 764 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 HOXC6P09630 235 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 ATXN1P54253 815 aaKnown RBP16.96■□□□□ 0.31
VARS-215ENST00000375663 DPYSQ14117 519 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 POLD3Q15054 466 aaPredicted RBP16.96■□□□□ 0.31
VARS-215ENST00000375663 LPCAT1Q8NF37 534 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 FBXO30Q8TB52 745 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 HERPUD2Q9BSE4 406 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 HMGXB4Q9UGU5 601 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 LAMA4Q16363 1823 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 CBX4O00257 560 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 FGF10O15520 208 aaPredicted RBP16.96■□□□□ 0.31
VARS-215ENST00000375663 SLC25A11Q02978 314 aaKnown RBP16.96■□□□□ 0.31
VARS-215ENST00000375663 KCNJ11Q14654 390 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 PGS1Q32NB8 556 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 C8orf59Q8N0T1 100 aaPredicted RBP16.96■□□□□ 0.31
VARS-215ENST00000375663 TMEM86AQ8N2M4 240 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 C1orf50Q9BV19 199 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 TUBGCP4Q9UGJ1 667 aa16.96■□□□□ 0.31
VARS-215ENST00000375663 RGPD5Q99666 1765 aa16.96■□□□□ 0.3
VARS-215ENST00000375663 IRF6O14896 467 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 CCNT2O60583 730 aaKnown RBP16.95■□□□□ 0.3
VARS-215ENST00000375663 COL6A2P12110 1019 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 BNIP2Q12982 314 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 TTC23Q5W5X9 447 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 PKN3Q6P5Z2 889 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 SCIMPQ6UWF3 145 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 HS6ST3Q8IZP7 471 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 PLEKHG4BQ96PX9 1271 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 VWA7Q9Y334 891 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 MSCO60682 206 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 RTN3O95197 1032 aaPredicted RBP16.95■□□□□ 0.3
VARS-215ENST00000375663 ILF2Q12905 390 aaKnown RBP16.95■□□□□ 0.3
VARS-215ENST00000375663 SEMA5AQ13591 1074 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 FAM9CQ8IZT9 166 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 ACTRT2Q8TDY3 377 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 DENND1AQ8TEH3 1009 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 ITGB6P18564 788 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 ICAM3P32942 547 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 RPS6KA3P51812 740 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 ARHGEF7Q14155 803 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 ASRGL1Q7L266 308 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 GIPC3Q8TF64 312 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 TWNKQ96RR1 684 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 TEX12Q9BXU0 123 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 ADGRE3Q9BY15 652 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 ROGDIQ9GZN7 287 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 NXF3Q9H4D5 531 aaKnown RBP16.95■□□□□ 0.3
VARS-215ENST00000375663 ELOVL6Q9H5J4 265 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 HMG20AQ9NP66 347 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 NMRK2Q9NPI5 230 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 CNGB3Q9NQW8 809 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 PTTG2Q9NZH5 202 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.95■□□□□ 0.3
VARS-215ENST00000375663 LEF1Q9UJU2 399 aaPredicted RBP16.95■□□□□ 0.3
VARS-215ENST00000375663 AZIN1O14977 448 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 PLSCR1O15162 318 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 MSH3P20585 1137 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 TKTP29401 623 aaKnown RBP16.95■□□□□ 0.3
VARS-215ENST00000375663 PPP3CCP48454 512 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 WNT3AP56704 352 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 TNK2Q07912 1038 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 SYTL3Q4VX76 610 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 FAM45BPQ6NSW5 357 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 IL27RAQ6UWB1 636 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 IGDCC3Q8IVU1 814 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 FAM45AQ8TCE6 357 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 AGAP2Q99490 1192 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 TRMOQ9BU70 441 aa16.95■□□□□ 0.3
VARS-215ENST00000375663 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 ADSLP30566 484 aaPredicted RBP16.94■□□□□ 0.3
VARS-215ENST00000375663 MAXP61244 160 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 LPIN1Q14693 890 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 C9orf57Q5W0N0 161 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 ZYG11AQ6WRX3 759 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 GPSM1Q86YR5 675 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 HDAC10Q969S8 669 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 HLA-DPA1P20036 260 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 ITGALP20701 1170 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 CCNFP41002 786 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 BROXQ5VW32 411 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 TMEM26Q6ZUK4 368 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 OTOP3Q7RTS5 596 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 MILR1Q7Z6M3 343 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 SH3KBP1Q96B97 665 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 SKA1Q96BD8 255 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 PDZD7Q9H5P4 517 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 TIMMDC1Q9NPL8 285 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 CATSPERZQ9NTU4 200 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 RHOCP08134 193 aa16.94■□□□□ 0.3
VARS-215ENST00000375663 PRIM2P49643 509 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms