RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 LSM12Q3MHD2 195 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 DLK2Q6UY11 383 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 FAM32AQ9Y421 112 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 POLR3HQ9Y535 204 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 COL22A1Q8NFW1 1626 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 TGDSO95455 350 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 RAP1GDS1P52306 607 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 NUP107P57740 925 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 RAP1GAP2Q684P5 730 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 FSTL4Q6MZW2 842 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 RHBDF2Q6PJF5 856 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 PAOXQ6QHF9 649 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 ADCK2Q7Z695 626 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 FAM120BQ96EK7 910 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 CDCA5Q96FF9 252 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GAD1Q99259 594 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 CLPBQ9H078 707 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 NOL6Q9H6R4 1146 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 XPNPEP1Q9NQW7 623 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GIMAP4Q9NUV9 329 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 VPS28Q9UK41 221 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 PCDHGB4Q9UN71 923 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GNEQ9Y223 722 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SCN7AQ01118 1682 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 DDNO94850 711 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 KCNH1O95259 989 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 VCLP18206 1134 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 TFEBP19484 476 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 POU1F1P28069 291 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 ABL2P42684 1182 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 RPL5P46777 297 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 HK2P52789 917 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 PRKAA2P54646 552 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 CCDC142Q17RM4 750 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 NEPROQ6NW34 567 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 TRAF7Q6Q0C0 670 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 OSCP1Q8WVF1 389 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 AAASQ9NRG9 546 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 PNPLA3Q9NST1 481 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SORCS3Q9UPU3 1222 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 RGS5O15539 181 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 ZBTB24O43167 697 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 RHOCP08134 193 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 MATKP42679 507 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 AAGABQ6PD74 315 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GLB1LQ6UWU2 654 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GPSM1Q86YR5 675 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SYTL1Q8IYJ3 562 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 DHRSXQ8N5I4 330 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 BPIFB6Q8NFQ5 453 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SPATA22Q8NHS9 363 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 STN1Q9H668 368 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 FZD10Q9ULW2 581 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 ATRNL1Q5VV63 1379 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GPR182O15218 404 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 KRT75O95678 551 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 PSEN2P49810 448 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SLC7A2P52569 658 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 TAF2Q6P1X5 1199 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SIAH1Q8IUQ4 282 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 UBR7Q8N806 425 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 ATG16L2Q8NAA4 619 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 NSMCE2Q96MF7 247 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 KLHL5Q96PQ7 755 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 MRIQ9BWK5 157 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 DUSP16Q9BY84 665 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 ATXN10Q9UBB4 475 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 CNOT6Q9ULM6 557 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 BTAF1O14981 1849 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 EVPLLA8MZ36 301 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 TMEM233B4DJY2 109 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 DHX15O43143 795 aaKnown RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 TSPAN1O60635 241 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 TCEA3O75764 348 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 ARIH2O95376 493 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 METTL18O95568 372 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 CCNFP41002 786 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GRM3Q14832 879 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 RALGPS2Q86X27 583 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 ACMSDQ8TDX5 336 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 C19orf60Q96EN9 201 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 BDH2Q9BUT1 245 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GBA3Q9H227 469 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 C2CD4BA6NLJ0 364 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GPR25O00155 361 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 TSC22D2O75157 780 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 TBX10O75333 385 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SLC11A2P49281 568 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 CDC16Q13042 620 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 VEPH1Q14D04 833 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 HSDL1Q3SXM5 330 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 KLHDC10Q6PID8 442 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 GALNT5Q7Z7M9 940 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 CIR1Q86X95 450 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 EID3Q8N140 333 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.6□□□□□ -1.35
SMC1A-202ENST00000375340 OR56A4Q8NGH8 313 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 DPY30Q9C005 99 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 CACNG4Q9UBN1 327 aa6.6□□□□□ -1.35
SMC1A-202ENST00000375340 RAMP2O60895 175 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms