RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 CHRAC1Q9NRG0 131 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 INTS10Q9NVR2 710 aaKnown RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 OXSMQ9NWU1 459 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 NCKIPSDQ9NZQ3 722 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 PRG3Q9Y2Y8 225 aaPredicted RBP8.82□□□□□ -1
SNRNP40-202ENST00000373720 RAP2CQ9Y3L5 183 aa8.82□□□□□ -1
SNRNP40-202ENST00000373720 FNDC1Q4ZHG4 1894 aaPredicted RBP8.81□□□□□ -1
SNRNP40-202ENST00000373720 A0A1B0GVM2 712 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 A0A1W2PQ67 120 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 TCAF2A6NFQ2 919 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 TRPC5OSA6NMA1 111 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 SLC38A8A6NNN8 435 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 GYG2O15488 501 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 KDELR3O43731 214 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ATP9BO43861 1147 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 BAIAP3O94812 1187 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ATP6V1G2O95670 118 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 PEX11BO96011 259 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ERVK-10P10266 1014 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 MYL2P10916 166 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 TACR2P21452 398 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 GCKP35557 465 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ARCN1P48444 511 aaKnown RBP8.81□□□□□ -1
SNRNP40-202ENST00000373720 SLC11A1P49279 550 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 WNT3AP56704 352 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 IRX4P78413 519 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 EFEMP1Q12805 493 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ZNF235Q14590 738 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 USP10Q14694 798 aaKnown RBP8.81□□□□□ -1
SNRNP40-202ENST00000373720 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
SNRNP40-202ENST00000373720 ACAP2Q15057 778 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 CRY1Q16526 586 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 DDR2Q16832 855 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 CTC1Q2NKJ3 1217 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 AARS2Q5JTZ9 985 aaKnown RBP8.81□□□□□ -1
SNRNP40-202ENST00000373720 CFAP157Q5JU67 520 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ADGRF1Q5T601 910 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 TSTD2Q5T7W7 516 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 PIK3R6Q5UE93 754 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 FAM45BPQ6NSW5 357 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 FBXL22Q6P050 247 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ZYG11AQ6WRX3 759 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 CDHR3Q6ZTQ4 885 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 CEP57Q86XR8 500 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 TCEAL8Q8IYN2 117 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 CMTR2Q8IYT2 770 aaKnown RBP8.81□□□□□ -1
SNRNP40-202ENST00000373720 FAM45AQ8TCE6 357 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 PPP1R13LQ8WUF5 828 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 STYXQ8WUJ0 223 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 IFT43Q96FT9 208 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 MRGPRX2Q96LB1 330 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 RPRD1AQ96P16 312 aaPredicted RBP8.81□□□□□ -1
SNRNP40-202ENST00000373720 FCRL3Q96P31 734 aaPredicted RBP8.81□□□□□ -1
SNRNP40-202ENST00000373720 NUDCD1Q96RS6 583 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 TMEM209Q96SK2 561 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ZIC5Q96T25 663 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 CCT7Q99832 543 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 CCDC28BQ9BUN5 200 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 HERC2P3Q9BVR0 1158 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ADGRE3Q9BY15 652 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 NACA2Q9H009 215 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 DRC3Q9H069 523 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 HIPK3Q9H422 1215 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 SYTL2Q9HCH5 934 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 TMEM45AQ9NWC5 275 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 MARCH5Q9NX47 278 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 WBP1LQ9NX94 342 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 NOP53Q9NZM5 478 aaKnown RBP8.81□□□□□ -1
SNRNP40-202ENST00000373720 GMIPQ9P107 970 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 SFMBT1Q9UHJ3 866 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 TAGLN3Q9UI15 199 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 TBC1D30Q9Y2I9 924 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 MFHAS1Q9Y4C4 1052 aa8.81□□□□□ -1
SNRNP40-202ENST00000373720 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 SLC12A8A0AV02 714 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 WDR91A4D1P6 747 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 SPECC1L-ADORA2AF8WAN1 911 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 NDST3O95803 873 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 GSRP00390 522 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 AMHP03971 560 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 HLA-DQB2P05538 268 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 FGF3P11487 239 aaPredicted RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 ATP5F1P24539 256 aaPredicted RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 ELF1P32519 619 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 CSNK1DP48730 415 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 RAP1GDS1P52306 607 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 EPHB3P54753 998 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 AQP5P55064 265 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 ADARP55265 1226 aaKnown RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 DSG1Q02413 1049 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 CDC16Q13042 620 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 ZNF177Q13360 481 aaPredicted RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 BMPR2Q13873 1038 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 RAB33AQ14088 237 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 PCLAFQ15004 111 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 PSMD5Q16401 504 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 TAF12Q16514 161 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 TRMT5Q32P41 509 aaKnown RBP8.8□□□□□ -1
SNRNP40-202ENST00000373720 CMPK2Q5EBM0 449 aa8.8□□□□□ -1
SNRNP40-202ENST00000373720 CERCAMQ5T4B2 595 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms