RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 PUM1Q14671 1186 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 LBRQ14739 615 aaKnown RBP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 NUMA1Q14980 2115 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 CFAP58Q5T655 872 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 STPG1Q5TH74 334 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 NEK5Q6P3R8 708 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 ADAT2Q7Z6V5 191 aaKnown RBP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 DAAM2Q86T65 1068 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 PRPF39Q86UA1 669 aaKnown RBP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 TRIM69Q86WT6 500 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 TSEN2Q8NCE0 465 aaKnown RBP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 RAB7BQ96AH8 199 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 RMDN1Q96DB5 314 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 ZNF830Q96NB3 372 aaPredicted RBP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 KLHL32Q96NJ5 620 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 PSKH2Q96QS6 385 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 RTKNQ9BST9 563 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 GTPBP2Q9BX10 602 aaKnown RBP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 MAK16Q9BXY0 300 aaKnown RBP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 CPEB1Q9BZB8 566 aaKnown RBP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 ZDHHC5Q9C0B5 715 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 GOLPH3Q9H4A6 298 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 TM9SF3Q9HD45 589 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 FSCN3Q9NQT6 498 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 REXO2Q9Y3B8 237 aaKnown RBP12.18□□□□□ -0.46
HDAC8-201ENST00000373554 ALG6Q9Y672 507 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 ZFHX4Q86UP3 3567 aa12.18□□□□□ -0.46
HDAC8-201ENST00000373554 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 C16orf96A6NNT2 1141 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 BTNL10A8MVZ5 291 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 NEMP1O14524 444 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 SLC30A4O14863 429 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 LATO43561 262 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 AP1G1O43747 822 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 RNGTTO60942 597 aaKnown RBP12.17□□□□□ -0.46
HDAC8-201ENST00000373554 PCDH8O95206 1070 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 SERPINA4P29622 427 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 MAT2AP31153 395 aaKnown RBP12.17□□□□□ -0.46
HDAC8-201ENST00000373554 HSPA9P38646 679 aaKnown RBP12.17□□□□□ -0.46
HDAC8-201ENST00000373554 GARSP41250 739 aaKnown RBP12.17□□□□□ -0.46
HDAC8-201ENST00000373554 CSNK1DP48730 415 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 RACK1P63244 317 aaKnown RBP12.17□□□□□ -0.46
HDAC8-201ENST00000373554 SLC10A7Q0GE19 358 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 KIF5AQ12840 1032 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 GRIK2Q13002 908 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 SETMARQ53H47 684 aaPredicted RBP12.17□□□□□ -0.46
HDAC8-201ENST00000373554 MARC1Q5VT66 337 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 NAPEPLDQ6IQ20 393 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 TIGD7Q6NT04 549 aaPredicted RBP12.17□□□□□ -0.46
HDAC8-201ENST00000373554 PQLC3Q8N755 202 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 PAF1Q8N7H5 531 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 TPCN2Q8NHX9 752 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 C1orf216Q8TAB5 229 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 SKA1Q96BD8 255 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 RNF25Q96BH1 459 aaPredicted RBP12.17□□□□□ -0.46
HDAC8-201ENST00000373554 SERAC1Q96JX3 654 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 SLC6A18Q96N87 628 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 RNF157Q96PX1 679 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 TUBGCP5Q96RT8 1024 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 ORAI3Q9BRQ5 295 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 DESI2Q9BSY9 194 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 ATP13A3Q9H7F0 1226 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 AASDHPPTQ9NRN7 309 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 HAUS2Q9NVX0 235 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 DLL3Q9NYJ7 618 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 DMTF1Q9Y222 760 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 CEP250Q9BV73 2442 aa12.17□□□□□ -0.46
HDAC8-201ENST00000373554 CHD8Q9HCK8 2581 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 A0A1W2PQU0 124 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 C3orf70A6NLC5 250 aaPredicted RBP12.16□□□□□ -0.46
HDAC8-201ENST00000373554 C4orf47A7E2U8 309 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 C10orf142B7Z368 130 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 APOL1O14791 398 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 INSIG1O15503 277 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 PJA2O43164 708 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 TSPAN6O43657 245 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 NEBLO76041 1014 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 MAP3K6O95382 1288 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 PIGNO95427 931 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 ZFXP17010 805 aaPredicted RBP12.16□□□□□ -0.46
HDAC8-201ENST00000373554 XPAP23025 273 aaPredicted RBP12.16□□□□□ -0.46
HDAC8-201ENST00000373554 ABL2P42684 1182 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 RGRP47804 291 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 CSNK1EP49674 416 aaKnown RBP12.16□□□□□ -0.46
HDAC8-201ENST00000373554 AP1S1P61966 158 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 GBE1Q04446 702 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 NSUN2Q08J23 767 aaKnown RBP eCLIP12.16□□□□□ -0.46
HDAC8-201ENST00000373554 IFI16Q16666 785 aaKnown RBP12.16□□□□□ -0.46
HDAC8-201ENST00000373554 SLC45A4Q5BKX6 768 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 KIAA1161Q6NSJ0 714 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 IL27RAQ6UWB1 636 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 SRLQ86TD4 932 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 TTC7BQ86TV6 843 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 ZSCAN30Q86W11 494 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 HORMAD1Q86X24 394 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 RFX6Q8HWS3 928 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 KATNAL2Q8IYT4 538 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 MINDY1Q8N5J2 469 aa12.16□□□□□ -0.46
HDAC8-201ENST00000373554 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms