RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 QKIQ96PU8 341 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDX4-201ENST00000373514 NAP1L3Q99457 506 aaPredicted RBP18.78■□□□□ 0.6
CDX4-201ENST00000373514 TTLL3Q9Y4R7 772 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 USP34Q70CQ2 3546 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 TP53BP1Q12888 1972 aaPredicted RBP18.77■□□□□ 0.6
CDX4-201ENST00000373514 IGHV1OR15-9A0A0B4J2B8 117 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 RPP40O75818 363 aaKnown RBP18.77■□□□□ 0.6
CDX4-201ENST00000373514 TJP3O95049 919 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 CCNB1P14635 433 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 DRD3P35462 400 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 NR2C2P49116 596 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 ERCC6LQ2NKX8 1250 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 MYLK3Q32MK0 819 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 MARC1Q5VT66 337 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 DSG4Q86SJ6 1040 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 SLC13A5Q86YT5 568 aaPredicted RBP18.77■□□□□ 0.6
CDX4-201ENST00000373514 TEX26Q8N6G2 289 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 NSMCE1Q8WV22 266 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 GAB3Q8WWW8 586 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 ATOH1Q92858 354 aaPredicted RBP18.77■□□□□ 0.6
CDX4-201ENST00000373514 PSKH2Q96QS6 385 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 MGME1Q9BQP7 344 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 AP1M1Q9BXS5 423 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 FARP1Q9Y4F1 1045 aaPredicted RBP18.77■□□□□ 0.6
CDX4-201ENST00000373514 PCDHGA2Q9Y5H1 932 aa18.77■□□□□ 0.6
CDX4-201ENST00000373514 C1QTNF3-AMACRE9PGA6 284 aa18.76■□□□□ 0.59
CDX4-201ENST00000373514 ADH1BP00325 375 aa18.76■□□□□ 0.59
CDX4-201ENST00000373514 UGT2B4P06133 528 aa18.76■□□□□ 0.59
CDX4-201ENST00000373514 C7P10643 843 aa18.76■□□□□ 0.59
CDX4-201ENST00000373514 IFI35P80217 286 aaPredicted RBP18.76■□□□□ 0.59
CDX4-201ENST00000373514 HNRNPDQ14103 355 aaKnown RBP18.76■□□□□ 0.59
CDX4-201ENST00000373514 TTC31Q49AM3 519 aaPredicted RBP18.76■□□□□ 0.59
CDX4-201ENST00000373514 SRLQ86TD4 932 aa18.76■□□□□ 0.59
CDX4-201ENST00000373514 GANCQ8TET4 914 aa18.76■□□□□ 0.59
CDX4-201ENST00000373514 TFB1MQ8WVM0 346 aaKnown RBP18.76■□□□□ 0.59
CDX4-201ENST00000373514 ATG4AQ8WYN0 398 aa18.76■□□□□ 0.59
CDX4-201ENST00000373514 KCNH6Q9H252 994 aa18.76■□□□□ 0.59
CDX4-201ENST00000373514 ITM2CQ9NQX7 267 aa18.76■□□□□ 0.59
CDX4-201ENST00000373514 H7C0C1 242 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 RNASEH2AO75792 299 aaKnown RBP18.75■□□□□ 0.59
CDX4-201ENST00000373514 PRNPP04156 253 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 CR2P20023 1033 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 C5AR1P21730 350 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 ATP5OP48047 213 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 SCNN1BP51168 640 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 EIF3EP60228 445 aaKnown RBP18.75■□□□□ 0.59
CDX4-201ENST00000373514 TUBB4BP68371 445 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 DSC2Q02487 901 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 CNTN1Q12860 1018 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 LPAL2Q16609 132 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 USP39Q53GS9 565 aaKnown RBP18.75■□□□□ 0.59
CDX4-201ENST00000373514 BZW1Q7L1Q6 419 aaKnown RBP18.75■□□□□ 0.59
CDX4-201ENST00000373514 PLPP6Q8IY26 295 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 MMGT1Q8N4V1 131 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 TMIEQ8NEW7 156 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 FATE1Q969F0 183 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 IL12RB2Q99665 862 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 RBM22Q9NW64 420 aaKnown RBP eCLIP18.75■□□□□ 0.59
CDX4-201ENST00000373514 FBXL12Q9NXK8 326 aa18.75■□□□□ 0.59
CDX4-201ENST00000373514 ZNF217O75362 1048 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 POP4O95707 220 aaKnown RBP18.74■□□□□ 0.59
CDX4-201ENST00000373514 JCHAINP01591 159 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 PTPN3P26045 913 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 RBL1P28749 1068 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 ACSL1P33121 698 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 ITKQ08881 620 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 SIX1Q15475 284 aaPredicted RBP18.74■□□□□ 0.59
CDX4-201ENST00000373514 SLC45A4Q5BKX6 768 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 LRRC73Q5JTD7 316 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 PRR23BQ6ZRT6 265 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 PARS2Q7L3T8 475 aaKnown RBP18.74■□□□□ 0.59
CDX4-201ENST00000373514 BBS5Q8N3I7 341 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 HDDC3Q8N4P3 179 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 CNTD1Q8N815 330 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 TOE1Q96GM8 510 aaKnown RBP18.74■□□□□ 0.59
CDX4-201ENST00000373514 SPACA7Q96KW9 195 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 KLHL32Q96NJ5 620 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 PHOX2BQ99453 314 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 OMDQ99983 421 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 NEBLO76041 1014 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 IGLV3-19P01714 112 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 RBP3P10745 1247 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 RENBPP51606 427 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 ZBTB16Q05516 673 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 IHHQ14623 411 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 ELF2Q15723 593 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 AGBL4Q5VU57 503 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 ZC3H14Q6PJT7 736 aaKnown RBP18.74■□□□□ 0.59
CDX4-201ENST00000373514 KBTBD6Q86V97 674 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 CAMK1DQ8IU85 385 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 DEFB119Q8N690 84 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 AGAP3Q96P47 875 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 SEMA3CQ99985 751 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 NEUROG2Q9H2A3 272 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 NOD2Q9HC29 1040 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 SCUBE2Q9NQ36 999 aa18.74■□□□□ 0.59
CDX4-201ENST00000373514 MYLKQ15746 1914 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 GOLGA6L10A0A0M3HER8 536 aa18.73■□□□□ 0.59
CDX4-201ENST00000373514 F5H423 210 aaPredicted RBP18.73■□□□□ 0.59
CDX4-201ENST00000373514 CCDC188H7C350 402 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms