RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 KLHL32Q96NJ5 620 aa22.99■■□□□ 1.27
COL9A2-201ENST00000372736 CSPG4P5Q96PW8 444 aa22.99■■□□□ 1.27
COL9A2-201ENST00000372736 CHP1Q99653 195 aa22.99■■□□□ 1.27
COL9A2-201ENST00000372736 DEF6Q9H4E7 631 aa22.99■■□□□ 1.27
COL9A2-201ENST00000372736 PCDH18Q9HCL0 1135 aa22.99■■□□□ 1.27
COL9A2-201ENST00000372736 CTTNBP2NLQ9P2B4 639 aa22.99■■□□□ 1.27
COL9A2-201ENST00000372736 UVRAGQ9P2Y5 699 aa22.99■■□□□ 1.27
COL9A2-201ENST00000372736 PCOLCE2Q9UKZ9 415 aa22.99■■□□□ 1.27
COL9A2-201ENST00000372736 A0A1B0GTQ1 180 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 DFFAO00273 331 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 SLC31A1O15431 190 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 INSIG1O15503 277 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 FLRT2O43155 660 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 PCDHGA12O60330 932 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 SHC2P98077 582 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 IL9RQ01113 521 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 KIAA1161Q6NSJ0 714 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 GDPD4Q6W3E5 623 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 IQCHQ86VS3 1027 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 CTNNBL1Q8WYA6 563 aaPredicted RBP22.98■■□□□ 1.27
COL9A2-201ENST00000372736 ELF4Q99607 663 aaPredicted RBP22.98■■□□□ 1.27
COL9A2-201ENST00000372736 MYOCQ99972 504 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 FZD3Q9NPG1 666 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 GDF3Q9NR23 364 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 ETNK2Q9NVF9 386 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 GGT7Q9UJ14 662 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 WASF3Q9UPY6 502 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 ITM2BQ9Y287 266 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 BTBD3Q9Y2F9 522 aa22.98■■□□□ 1.27
COL9A2-201ENST00000372736 AKR1B10O60218 316 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 DFNA5O60443 496 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 H2AFZP0C0S5 128 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 TMEM253P0C7T8 217 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 AMPD1P23109 780 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 RAD51Q06609 339 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 OVGP1Q12889 678 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 FGL2Q14314 439 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 SHBQ15464 509 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 TSR1Q2NL82 804 aaKnown RBP22.97■■□□□ 1.27
COL9A2-201ENST00000372736 PRAMEF14Q5SWL7 426 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 H2AFVQ71UI9 128 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 SPATS2Q86XZ4 545 aaKnown RBP22.97■■□□□ 1.27
COL9A2-201ENST00000372736 CNGA4Q8IV77 575 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 LZTR1Q8N653 840 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 FAM71BQ8TC56 605 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 SETD7Q8WTS6 366 aaKnown RBP22.97■■□□□ 1.27
COL9A2-201ENST00000372736 RAB7BQ96AH8 199 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 CPEB1Q9BZB8 566 aaKnown RBP22.97■■□□□ 1.27
COL9A2-201ENST00000372736 NHEJ1Q9H9Q4 299 aaPredicted RBP22.97■■□□□ 1.27
COL9A2-201ENST00000372736 SP110Q9HB58 689 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 ANGPTL2Q9UKU9 493 aa22.97■■□□□ 1.27
COL9A2-201ENST00000372736 ANKRD36A6QL64 1941 aa22.96■■□□□ 1.27
COL9A2-201ENST00000372736 AREL1O15033 823 aa22.96■■□□□ 1.27
COL9A2-201ENST00000372736 PROSCO94903 275 aa22.96■■□□□ 1.27
COL9A2-201ENST00000372736 HNRNPA2B1P22626 353 aaKnown RBP22.96■■□□□ 1.27
COL9A2-201ENST00000372736 RGRP47804 291 aa22.96■■□□□ 1.27
COL9A2-201ENST00000372736 RPS21P63220 83 aaKnown RBP22.96■■□□□ 1.27
COL9A2-201ENST00000372736 FOXC1Q12948 553 aa22.96■■□□□ 1.27
COL9A2-201ENST00000372736 STAT4Q14765 748 aa22.96■■□□□ 1.27
COL9A2-201ENST00000372736 TRIP6Q15654 476 aaKnown RBP22.96■■□□□ 1.27
COL9A2-201ENST00000372736 TMCO3Q6UWJ1 677 aa22.96■■□□□ 1.27
COL9A2-201ENST00000372736 SPTLC3Q9NUV7 552 aa22.96■■□□□ 1.27
COL9A2-201ENST00000372736 DKK3Q9UBP4 350 aa22.96■■□□□ 1.27
COL9A2-201ENST00000372736 PALMO75781 387 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 PIGNO95427 931 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 AKT2P31751 481 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 ARSEP51690 589 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 IL10RBQ08334 325 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 SUZ12Q15022 739 aaKnown RBP22.95■■□□□ 1.26
COL9A2-201ENST00000372736 LRRC73Q5JTD7 316 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 GCNT7Q6ZNI0 430 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 FEM1CQ96JP0 617 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 TRIM5Q9C035 493 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 ERVMER34-1Q9H9K5 563 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 RCOR3Q9P2K3 495 aaPredicted RBP22.95■■□□□ 1.26
COL9A2-201ENST00000372736 IPO11Q9UI26 975 aaKnown RBP22.95■■□□□ 1.26
COL9A2-201ENST00000372736 PCDHB9Q9Y5E1 797 aa22.95■■□□□ 1.26
COL9A2-201ENST00000372736 AKR1B15C9JRZ8 316 aaPredicted RBP22.94■■□□□ 1.26
COL9A2-201ENST00000372736 TSPAN6O43657 245 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 TOP3BO95985 862 aaKnown RBP22.94■■□□□ 1.26
COL9A2-201ENST00000372736 CD48P09326 243 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 IL4RP24394 825 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 MAN1A1P33908 653 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 SSR1P43307 286 aaKnown RBP22.94■■□□□ 1.26
COL9A2-201ENST00000372736 CDH6P55285 790 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 TAS2R40P59535 323 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 KRT81Q14533 505 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 HADHQ16836 314 aaKnown RBP22.94■■□□□ 1.26
COL9A2-201ENST00000372736 GLRX5Q86SX6 157 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 ZSCAN30Q86W11 494 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 TSEN2Q8NCE0 465 aaKnown RBP22.94■■□□□ 1.26
COL9A2-201ENST00000372736 CCDC42Q96M95 316 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 CINPQ9BW66 212 aaPredicted RBP22.94■■□□□ 1.26
COL9A2-201ENST00000372736 SLC17A9Q9BYT1 436 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 SPEGQ15772 3267 aa22.94■■□□□ 1.26
COL9A2-201ENST00000372736 COL5A1P20908 1838 aaPredicted RBP22.94■■□□□ 1.26
COL9A2-201ENST00000372736 SHROOM3Q8TF72 1996 aa22.93■■□□□ 1.26
COL9A2-201ENST00000372736 TSPAN11A1L157 253 aa22.93■■□□□ 1.26
COL9A2-201ENST00000372736 MUSKO15146 869 aa22.93■■□□□ 1.26
COL9A2-201ENST00000372736 RAD51BO15315 384 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms