RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PATJQ8NI35 1801 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 CFLARO15519 480 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 PMLP29590 882 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 PSEN2P49810 448 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 CLCNKBP51801 687 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 CREB5Q02930 508 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 CNGA3Q16281 694 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 NXNQ6DKJ4 435 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 TWF2Q6IBS0 349 aaKnown RBP12.89□□□□□ -0.35
CTPS1-202ENST00000372621 POTEHQ6S545 545 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTPS1-202ENST00000372621 CATSPER1Q8NEC5 780 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 HMGCLL1Q8TB92 370 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 SLC10A4Q96EP9 437 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 PKP2Q99959 881 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 COPS7BQ9H9Q2 264 aaPredicted RBP12.89□□□□□ -0.35
CTPS1-202ENST00000372621 ARHGEF38Q9NXL2 777 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 ANXA9O76027 345 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 TFAP2AP05549 437 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 HOXC13P31276 330 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 TAS2R39P59534 338 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 ART3Q13508 389 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 SH2D4BQ5SQS7 431 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 PRAMEF19Q5SWL8 479 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 CNSTQ6PJW8 725 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 PIWIL4Q7Z3Z4 852 aaKnown RBP12.89□□□□□ -0.35
CTPS1-202ENST00000372621 SCML4Q8N228 414 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 RNF148Q8N7C7 305 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 TMEM102Q8N9M5 508 aaPredicted RBP12.89□□□□□ -0.35
CTPS1-202ENST00000372621 HEXDCQ8WVB3 486 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 NPAS2Q99743 824 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 RTP3Q9BQQ7 232 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 UBE2OQ9C0C9 1292 aaKnown RBP12.89□□□□□ -0.35
CTPS1-202ENST00000372621 SUDS3Q9H7L9 328 aaPredicted RBP12.89□□□□□ -0.35
CTPS1-202ENST00000372621 IGSF5Q9NSI5 407 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 UTP6Q9NYH9 597 aaKnown RBP12.89□□□□□ -0.35
CTPS1-202ENST00000372621 CLIC5Q9NZA1 410 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 NCKIPSDQ9NZQ3 722 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 NDUFA13Q9P0J0 144 aa12.89□□□□□ -0.35
CTPS1-202ENST00000372621 A0A087X1B8 175 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 TRPC5OSA6NMA1 111 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 OR6B1O95007 311 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 ETS2P15036 469 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 USP50Q70EL3 339 aaPredicted RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 PPHLN1Q8NEY8 458 aaKnown RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 IPMKQ8NFU5 416 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 DQX1Q8TE96 717 aaKnown RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 LENG1Q96BZ8 264 aaPredicted RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 FICDQ9BVA6 458 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 SLC38A7Q9NVC3 462 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 PCDHGA7Q9Y5G6 932 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 AP4B1Q9Y6B7 739 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 DFFAO00273 331 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 MATN3O15232 486 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 HOXC8P31273 242 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 CYP2C18P33260 490 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 SULT2A1Q06520 285 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 R3HDM1Q15032 1099 aaKnown RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 USP41Q3LFD5 358 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 MANEALQ5VSG8 457 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 TRIM67Q6ZTA4 783 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 PLEKHH3Q7Z736 793 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 TLK2Q86UE8 772 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 CCNYL1Q8N7R7 359 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 CEP70Q8NHQ1 597 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 SPPL2BQ8TCT7 592 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 Q9H521 79 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 VCX3AQ9NNX9 186 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 MIOSQ9NXC5 875 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 TANC1Q9C0D5 1861 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 DOCK3Q8IZD9 2030 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 PGM3O95394 542 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 MYBPC1Q00872 1141 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 OLFML2BQ68BL8 750 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 KIAA0930Q6ICG6 404 aaPredicted RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 RWDD4Q6NW29 188 aaKnown RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 RANBP10Q6VN20 620 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 AHI1Q8N157 1196 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 ATPAF2Q8N5M1 289 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 ASB9Q96DX5 294 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 UNKQ9C0B0 810 aaKnown RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 POMKQ9H5K3 350 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 ZNF696Q9H7X3 374 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 PLK2Q9NYY3 685 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 CNOT11Q9UKZ1 510 aaKnown RBP12.88□□□□□ -0.35
CTPS1-202ENST00000372621 SARDHQ9UL12 918 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 MIA3Q5JRA6 1907 aa12.88□□□□□ -0.35
CTPS1-202ENST00000372621 ATP5F1P24539 256 aaPredicted RBP12.87□□□□□ -0.35
CTPS1-202ENST00000372621 CD151P48509 253 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 POU4F1Q01851 419 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 GK3PQ14409 553 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 FAM171BQ6P995 826 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 MYLPFQ96A32 169 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 ELMO2Q96JJ3 720 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 MRGPRX2Q96LB1 330 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 SLC39A8Q9C0K1 460 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 TNFRSF12AQ9NP84 129 aa12.87□□□□□ -0.35
CTPS1-202ENST00000372621 ENTPD7Q9NQZ7 604 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms