RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ASIC4Q96FT7 647 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 C1orf74Q96LT6 269 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 POLR3FQ9H1D9 316 aaPredicted RBP8.97□□□□□ -0.97
ATG4A-203ENST00000372232 SERHL2Q9H4I8 314 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 ACP6Q9NPH0 428 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 ATP13A2Q9NQ11 1180 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 PNPLA3Q9NST1 481 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 RAB20Q9NX57 234 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 SUCOQ9UBS9 1254 aaKnown RBP8.97□□□□□ -0.97
ATG4A-203ENST00000372232 SLC8A2Q9UPR5 921 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 POLHQ9Y253 713 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 ALG6Q9Y672 507 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 PHIPQ8WWQ0 1821 aa8.97□□□□□ -0.97
ATG4A-203ENST00000372232 C2orf71A6NGG8 1288 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 A8MX80 341 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 RASGRP1O95267 797 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 DLATP10515 647 aaKnown RBP8.96□□□□□ -0.97
ATG4A-203ENST00000372232 AOC1P19801 751 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 GRK2P25098 689 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 IVDP26440 423 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 ICAM3P32942 547 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 NKX2-5P52952 324 aaPredicted RBP8.96□□□□□ -0.97
ATG4A-203ENST00000372232 ECT2LQ008S8 904 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 SMARCB1Q12824 385 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 ZNF846Q147U1 533 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 POU6F1Q14863 301 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 STXBP2Q15833 593 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 C11orf63Q6NUN7 778 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 PRPF39Q86UA1 669 aaKnown RBP8.96□□□□□ -0.97
ATG4A-203ENST00000372232 CARM1Q86X55 608 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 ANKRD53Q8N9V6 530 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 DNERQ8NFT8 737 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 PMEPA1Q969W9 287 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 RMND5BQ96G75 393 aaPredicted RBP8.96□□□□□ -0.97
ATG4A-203ENST00000372232 WNT8AQ9H1J5 351 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 ENAMQ9NRM1 1142 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 OLAHQ9NV23 265 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 RIMS3Q9UJD0 308 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 MAFFQ9ULX9 164 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 ARHGAP26Q9UNA1 814 aa8.96□□□□□ -0.97
ATG4A-203ENST00000372232 A0A087WXM4 84 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 EXOC1LA0A1B0GW35 172 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 OR5K3A6NET4 321 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 MIF4GDA9UHW6 222 aaKnown RBP8.96□□□□□ -0.98
ATG4A-203ENST00000372232 H0YCG3 227 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 TM9SF1O15321 606 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 ZC3H11AO75152 810 aaKnown RBP eCLIP8.96□□□□□ -0.98
ATG4A-203ENST00000372232 USP2O75604 605 aaPredicted RBP8.96□□□□□ -0.98
ATG4A-203ENST00000372232 KRT3P12035 628 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 CYP11B1P15538 503 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 KRT15P19012 456 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 SLC26A3P40879 764 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 FMO1Q01740 532 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 CNTN2Q02246 1040 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 FSTL1Q12841 308 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 EMC2Q15006 297 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 SIX1Q15475 284 aaPredicted RBP8.96□□□□□ -0.98
ATG4A-203ENST00000372232 DUSP7Q16829 419 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 SHEQ5VZ18 495 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 FAM205BPQ63HN1 556 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 AADACL2Q6P093 401 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 CHSY1Q86X52 802 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 GPC2Q8N158 579 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 AFAP1L2Q8N4X5 818 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 DTX3Q8N9I9 347 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 SIMC1Q8NDZ2 872 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 CHST13Q8NET6 341 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 GRIN3AQ8TCU5 1115 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 NT5C1BQ96P26 610 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 FAM213AQ9BRX8 229 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 TARS2Q9BW92 718 aaKnown RBP8.96□□□□□ -0.98
ATG4A-203ENST00000372232 EMILIN2Q9BXX0 1053 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 LRRC19Q9H756 370 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 SMYD3Q9H7B4 428 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 PPCSQ9HAB8 311 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 CXorf21Q9HAI6 301 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 DCAF16Q9NXF7 216 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 PPARGC1AQ9UBK2 798 aaKnown RBP8.96□□□□□ -0.98
ATG4A-203ENST00000372232 CDH22Q9UJ99 828 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 PTPN22Q9Y2R2 807 aa8.96□□□□□ -0.98
ATG4A-203ENST00000372232 A0A0B4J203 849 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 EVPLLA8MZ36 301 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 H3BUI4 141 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 DYRK3O43781 588 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 CLPXO76031 633 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 MTA2O94776 668 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 ERBB2P04626 1255 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 COL11A1P12107 1806 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-203ENST00000372232 ITIH1P19827 911 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 L1CAMP32004 1257 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 IDUAP35475 653 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 ITGA8P53708 1063 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 MAP3K7CLP57077 242 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 CDC20Q12834 499 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 NFATC3Q12968 1075 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 CLEC16AQ2KHT3 1053 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 C4orf17Q53FE4 359 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 MDH1BQ5I0G3 518 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 TREML2Q5T2D2 321 aa8.95□□□□□ -0.98
ATG4A-203ENST00000372232 UBE2UQ5VVX9 321 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms