RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 LINC00523Q86TU6 105 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 COLGALT2Q8IYK4 626 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 SREK1Q8WXA9 508 aaKnown RBP11.88□□□□□ -0.51
PDE6C-201ENST00000371447 RMDN1Q96DB5 314 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 TSPAN18Q96SJ8 248 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 PKMYT1Q99640 499 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 OSBPL2Q9H1P3 480 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 NOL6Q9H6R4 1146 aaKnown RBP11.88□□□□□ -0.51
PDE6C-201ENST00000371447 SLC7A8Q9UHI5 535 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ZDHHC2Q9UIJ5 367 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ADAM28Q9UKQ2 775 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 PCDHB8Q9UN66 801 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 RAMP2O60895 175 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 CCDC166P0CW27 439 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ARNTP27540 789 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 COPAP53621 1224 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 AIF1P55008 147 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 PKNOX1P55347 436 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 DLG1Q12959 904 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 IHHQ14623 411 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 LAYNQ6UX15 382 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 HPS6Q86YV9 775 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 DENND1CQ8IV53 801 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 EFHBQ8N7U6 833 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 ACMSDQ8TDX5 336 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 HEXDCQ8WVB3 486 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 AUTS2Q8WXX7 1259 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 IRGQQ8WZA9 623 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 IFT43Q96FT9 208 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 TBATAQ96M53 351 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 VAT1Q99536 393 aa11.88□□□□□ -0.51
PDE6C-201ENST00000371447 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
PDE6C-201ENST00000371447 TET1Q8NFU7 2136 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 SCN4AP35499 1836 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 A0A1W2PQ45 241 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 A0A1W2PQY0 241 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 A8MX80 341 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 C9JVG2 144 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 CYP11A1P05108 521 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 INHAP05111 366 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 SERPINA6P08185 405 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 ENO3P13929 434 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 SLC11A1P49279 550 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 NUDT2P50583 147 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 ASPHQ12797 758 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 ZNF235Q14590 738 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 C6orf163Q5TEZ5 329 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 FRMD7Q6ZUT3 714 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 TMPRSS6Q8IU80 811 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 ZYG11BQ9C0D3 744 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 ILKAPQ9H0C8 392 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 GPAMQ9HCL2 828 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 MARCH4Q9P2E8 410 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 ANKRD12Q6UB98 2062 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 NCF1BA6NI72 391 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 TTC36A6NLP5 189 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 NCF1CA8MVU1 366 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 CBX4O00257 560 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 DLX3O60479 287 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 NCF1P14598 390 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 GRK2P25098 689 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 OR1D2P34982 312 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 BRMS1LQ5PSV4 323 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 SH2D4BQ5SQS7 431 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 SDCCAG8Q86SQ7 713 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 OR13C4Q8NGS5 318 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 LENG8Q96PV6 779 aaPredicted RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 HAPLN3Q96S86 360 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 CCDC106Q9BWC9 280 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 RHOJQ9H4E5 214 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 POMKQ9H5K3 350 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 ALG9Q9H6U8 611 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 EBF2Q9HAK2 575 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 BPIFA1Q9NP55 256 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 SARS2Q9NP81 518 aaKnown RBP11.87□□□□□ -0.51
PDE6C-201ENST00000371447 TCF7L2Q9NQB0 619 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 LNPEPQ9UIQ6 1025 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 TCAF1Q9Y4C2 921 aa11.87□□□□□ -0.51
PDE6C-201ENST00000371447 EME2A4GXA9 379 aaPredicted RBP11.86□□□□□ -0.51
PDE6C-201ENST00000371447 ERI2A8K979 691 aaKnown RBP11.86□□□□□ -0.51
PDE6C-201ENST00000371447 CAPN14A8MX76 684 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 STX16-NPEPL1H3BU86 382 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 GJB5O95377 273 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 PSMG1O95456 288 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 KCNA5P22460 613 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 CD151P48509 253 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 RPAINQ86UA6 219 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 SNX32Q86XE0 403 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 CENPLQ8N0S6 344 aaPredicted RBP11.86□□□□□ -0.51
PDE6C-201ENST00000371447 FAM156AQ8NDB6 213 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 OR6K2Q8NGY2 324 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 FCRL5Q96RD9 977 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 FAM96AQ9H5X1 160 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 NEU3Q9UQ49 428 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 FAM50BQ9Y247 325 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 SF3B1O75533 1304 aaKnown RBP eCLIP11.86□□□□□ -0.51
PDE6C-201ENST00000371447 MAGEB16A2A368 324 aa11.86□□□□□ -0.51
PDE6C-201ENST00000371447 NBNO60934 754 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms