RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 IDH2P48735 452 aaKnown RBP16.06■□□□□ 0.16
COL17A1-202ENST00000369733 METTL21CQ5VZV1 264 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 LENG8Q96PV6 779 aaPredicted RBP16.06■□□□□ 0.16
COL17A1-202ENST00000369733 ACO2Q99798 780 aaKnown RBP16.06■□□□□ 0.16
COL17A1-202ENST00000369733 CLEC4MQ9H2X3 399 aaPredicted RBP16.06■□□□□ 0.16
COL17A1-202ENST00000369733 RMI1Q9H9A7 625 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 FANCEQ9HB96 536 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 CRNNQ9UBG3 495 aaPredicted RBP16.06■□□□□ 0.16
COL17A1-202ENST00000369733 H3BN98 237 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 C2P06681 752 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 IL12AP29459 219 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 OR1E1P30953 314 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 OAZ1P54368 228 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 PLCL1Q15111 1095 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 VSIG10LQ86VR7 867 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 CYP4Z2PQ8N1L4 340 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 ZFYVE28Q9HCC9 887 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 KRCC1Q9NPI7 259 aaPredicted RBP16.06■□□□□ 0.16
COL17A1-202ENST00000369733 H3BRB1 525 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 IL2P60568 153 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 PPM1JQ5JR12 505 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 KBTBD8Q8NFY9 601 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 OR2T34Q8NGX1 318 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 OR2T3Q8NH03 318 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 C19orf60Q96EN9 201 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 HOPXQ9BPY8 73 aaPredicted RBP16.06■□□□□ 0.16
COL17A1-202ENST00000369733 TUT1Q9H6E5 874 aaKnown RBP16.06■□□□□ 0.16
COL17A1-202ENST00000369733 SNCAIPQ9Y6H5 919 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 LINC00032P0C843 101 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 ZNF7P17097 686 aaPredicted RBP16.06■□□□□ 0.16
COL17A1-202ENST00000369733 ITGA1P56199 1179 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 CAPSQ13938 189 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 GRIK4Q16099 956 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 ELMSAN1Q6PJG2 1045 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 CUZD1Q86UP6 607 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 FAM83AQ86UY5 434 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 NETO2Q8NC67 525 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 LPGAT1Q92604 370 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 VPS45Q9NRW7 570 aa16.06■□□□□ 0.16
COL17A1-202ENST00000369733 BBIP1A8MTZ0 92 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TNFRSF21O75509 655 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 CYP2B6P20813 491 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 IDH3AP50213 366 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TAB1Q15750 504 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 PROSER1Q86XN7 944 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 SPPL2CQ8IUH8 684 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 CENPIQ92674 756 aaPredicted RBP16.05■□□□□ 0.16
COL17A1-202ENST00000369733 SLC4A9Q96Q91 983 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 CAMKK2Q96RR4 588 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TUBGCP5Q96RT8 1024 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 LHX5Q9H2C1 402 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 ACSS2Q9NR19 701 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 RNF181Q9P0P0 153 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 OPTCQ9UBM4 332 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 VPS28Q9UK41 221 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 POMPQ9Y244 141 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 DYRK1BQ9Y463 629 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 SNX8Q9Y5X2 465 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 AZIN1O14977 448 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 EPN2O95208 641 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 ZBTB11O95625 1053 aaPredicted RBP16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TSPAN19P0C672 248 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 GCNT7Q6ZNI0 430 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 AKAP14Q86UN6 197 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TBC1D21Q8IYX1 336 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 CLYBLQ8N0X4 340 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 P2RY11Q96G91 374 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 SNPHO15079 494 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 CNPP09543 421 aaKnown RBP16.05■□□□□ 0.16
COL17A1-202ENST00000369733 FGD3Q5JSP0 725 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 MTFMTQ96DP5 389 aaKnown RBP16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TRIM39Q9HCM9 518 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TNPO3Q9Y5L0 923 aaKnown RBP16.05■□□□□ 0.16
COL17A1-202ENST00000369733 LRCH4O75427 683 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 MLYCDO95822 493 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 IDO1P14902 403 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 MYL12AP19105 171 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 ACTR3P61158 418 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 MAPKAPK3Q16644 382 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 FSCN1Q16658 493 aaKnown RBP16.05■□□□□ 0.16
COL17A1-202ENST00000369733 ZNF549Q6P9A3 640 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 HSFY1Q96LI6 401 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 SERPINB11Q96P15 392 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TRAF6Q9Y4K3 522 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 A0A0J9YYE9 177 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 KCNU1A8MYU2 1149 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 H0YC42 278 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 GPR182O15218 404 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 CCNFP41002 786 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 CNTN2Q02246 1040 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 FSTL1Q12841 308 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 SCIMPQ6UWF3 145 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 C15orf52Q6ZUT6 534 aaKnown RBP16.05■□□□□ 0.16
COL17A1-202ENST00000369733 ANKS1BQ7Z6G8 1248 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 EPHX4Q8IUS5 362 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 MYDGFQ969H8 173 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 MIEF1Q9NQG6 463 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 TMEM216Q9P0N5 145 aa16.05■□□□□ 0.16
COL17A1-202ENST00000369733 KLQ9UEF7 1012 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms