RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RPL10AP62906 217 aaKnown RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 SCAPQ12770 1279 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 CHI3L2Q15782 390 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 LGI2Q8N0V4 545 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 FIBCD1Q8N539 461 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ATPAF2Q8N5M1 289 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 SLC25A41Q8N5S1 370 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 DNAAF3Q8N9W5 541 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 MZB1Q8WU39 189 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 C17orf80Q9BSJ5 609 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 DHRS4Q9BTZ2 278 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ZNF334Q9HCZ1 680 aaPredicted RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 PDP2Q9P2J9 529 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 FETUBQ9UGM5 382 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 TMCO1Q9UM00 188 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 NEU3Q9UQ49 428 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 A0A0J9YVX5 310 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 CCDC22O60826 627 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 PMPCBO75439 489 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 SPAG6O75602 509 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 CXCL14O95715 111 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ASLP04424 464 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 CTNNB1P35222 781 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 MAGEA11P43364 429 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 OCRLQ01968 901 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 PAFAH1B3Q15102 231 aaKnown RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 C1orf53Q5VUE5 145 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 NADSYN1Q6IA69 706 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ZCCHC23Q6ZST2 131 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ZNF534Q76KX8 674 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ARMCX6Q7L4S7 300 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 DNAJB7Q7Z6W7 309 aaPredicted RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 ARL14EPQ8N8R7 260 aaPredicted RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 STMN2Q93045 179 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 NSL1Q96IY1 281 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 IL23AQ9NPF7 189 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ENTPD7Q9NQZ7 604 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 HCFC1R1Q9NWW0 138 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 MTO1Q9Y2Z2 717 aaKnown RBP10.8□□□□□ -0.68
TPM3-212ENST00000368533 COL4A6Q14031 1691 aa10.8□□□□□ -0.68
TPM3-212ENST00000368533 ARHGAP42A6NI28 874 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 KIAA0355O15063 1070 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 CCL16O15467 120 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 RFPL2O75678 378 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 PARNO95453 639 aaKnown RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 TOP3BO95985 862 aaKnown RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 ENO1P06733 434 aaKnown RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 HMGA1P17096 107 aaKnown RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 SLC6A4P31645 630 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 CD68P34810 354 aaPredicted RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 GMPRP36959 345 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 ACVRL1P37023 503 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 FPGSQ05932 587 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 PRKD1Q15139 912 aaPredicted RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 CMPK2Q5EBM0 449 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 ALYREFQ86V81 257 aaKnown RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 ARHGAP12Q8IWW6 846 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 IPMKQ8NFU5 416 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 MIPOL1Q8TD10 442 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 HMCESQ96FZ2 354 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 EXOC2Q96KP1 924 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 TCF25Q9BQ70 676 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 SPON2Q9BUD6 331 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 RRN3Q9NYV6 651 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 TLR6Q9Y2C9 796 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 PCDHB12Q9Y5F1 795 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 SLC4A7Q9Y6M7 1214 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 A0A0D9SEW6 157 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 TGM5O43548 720 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 PGGT1BP53609 377 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 MLLT6P55198 1093 aaPredicted RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 DSG1Q02413 1049 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 KDSRQ06136 332 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 UNC5AQ6ZN44 842 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 CNTD1Q8N815 330 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 OR52K2Q8NGK3 314 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 PSMG2Q969U7 264 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 E2F7Q96AV8 911 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 CLPTM1LQ96KA5 538 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 FAM192AQ9GZU8 254 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 BRD8Q9H0E9 1235 aa10.79□□□□□ -0.68
TPM3-212ENST00000368533 RC3H2Q9HBD1 1191 aaKnown RBP10.79□□□□□ -0.68
TPM3-212ENST00000368533 ZNF840PA6NDX5 716 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 FCHO1O14526 889 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 GCATO75600 419 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 KLKB1P03952 638 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 LAG3P18627 525 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 GLDCP23378 1020 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 DNAJB1P25685 340 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 OR1E1P30953 314 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 IRS1P35568 1242 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 ATP5C1P36542 298 aaKnown RBP10.78□□□□□ -0.68
TPM3-212ENST00000368533 CDK16Q00536 496 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 BST1Q10588 318 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 CERCAMQ5T4B2 595 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 CEP70Q8NHQ1 597 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 SHKBP1Q8TBC3 707 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 NAT14Q8WUY8 206 aa10.78□□□□□ -0.68
TPM3-212ENST00000368533 DPF3Q92784 378 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms