RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 COL4A6Q14031 1691 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 SPECC1L-ADORA2AF8WAN1 911 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 SLCO1B7G3V0H7 640 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 VAPBO95292 243 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 PEX11BO96011 259 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 PRKCGP05129 697 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 KITP10721 976 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 STMN1P16949 149 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 ARCN1P48444 511 aaKnown RBP14.17□□□□□ -0.14
USF1-202ENST00000368020 CD151P48509 253 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 SLC11A1P49279 550 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 TUFMP49411 452 aaKnown RBP14.17□□□□□ -0.14
USF1-202ENST00000368020 GPR15P49685 360 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 GATMP50440 423 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 SLC12A2P55011 1212 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 RAB10P61026 200 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 GRM3Q14832 879 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 POLD3Q15054 466 aaPredicted RBP14.17□□□□□ -0.14
USF1-202ENST00000368020 PSMD5Q16401 504 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 SDHAF4Q5VUM1 108 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 CES4AQ5XG92 561 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 ZYG11AQ6WRX3 759 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 ALYREFQ86V81 257 aaKnown RBP14.17□□□□□ -0.14
USF1-202ENST00000368020 TEX9Q8N6V9 391 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 FAM13CQ8NE31 585 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 TSPAN17Q96FV3 270 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 ATXN7L3BQ96GX2 97 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 SEPT5Q99719 369 aaPredicted RBP14.17□□□□□ -0.14
USF1-202ENST00000368020 EBF2Q9HAK2 575 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 RNPEPL1Q9HAU8 725 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 MARCOQ9UEW3 520 aaPredicted RBP14.17□□□□□ -0.14
USF1-202ENST00000368020 ACOT9Q9Y305 439 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 INSL6Q9Y581 213 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 PTPRSQ13332 1948 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 CHD5Q8TDI0 1954 aa14.17□□□□□ -0.14
USF1-202ENST00000368020 SLC12A8A0AV02 714 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 MAGEC1O60732 1142 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 HSPA4LO95757 839 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 HOXB8P17481 243 aaPredicted RBP14.16□□□□□ -0.14
USF1-202ENST00000368020 SERPINB5P36952 375 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 PBX3P40426 434 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 SERINC3Q13530 473 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 ITGA9Q13797 1035 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 FSCBQ5H9T9 825 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 CFAP157Q5JU67 520 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 TMCO4Q5TGY1 634 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 LIPMQ5VYY2 423 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 METTL21CQ5VZV1 264 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 FBXL22Q6P050 247 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 KLHDC10Q6PID8 442 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 KIRREL3Q8IZU9 778 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 ZNF419Q96HQ0 510 aaPredicted RBP14.16□□□□□ -0.14
USF1-202ENST00000368020 RPRD1AQ96P16 312 aaPredicted RBP14.16□□□□□ -0.14
USF1-202ENST00000368020 SORT1Q99523 831 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 ACE2Q9BYF1 805 aaPredicted RBP14.16□□□□□ -0.14
USF1-202ENST00000368020 C20orf27Q9GZN8 174 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 POLR1EQ9GZS1 481 aaKnown RBP14.16□□□□□ -0.14
USF1-202ENST00000368020 TASP1Q9H6P5 420 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 NT5MQ9NPB1 228 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 OXSMQ9NWU1 459 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 DNMT3LQ9UJW3 386 aa14.16□□□□□ -0.14
USF1-202ENST00000368020 FAM95CA0A1B0GW59 222 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 F5H5T6 163 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 G3V2L1 256 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 GSC2O15499 205 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 SLC7A4O43246 635 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 TLR5O60602 858 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 EPOP01588 193 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 AHSGP02765 367 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 GALTP07902 379 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 MAGEA10P43363 369 aaPredicted RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 ALDH7A1P49419 539 aaKnown RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 CLCN5P51795 746 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 GTF2A1P52655 376 aaPredicted RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 ARPP19P56211 112 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 C5orf22Q49AR2 442 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 C6orf163Q5TEZ5 329 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 SNX30Q5VWJ9 437 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 NEPROQ6NW34 567 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 TFAP2DQ7Z6R9 452 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 ZNF354CQ86Y25 554 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 MIB1Q86YT6 1006 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 HERC6Q8IVU3 1022 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 ENDOVQ8N8Q3 282 aaKnown RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 TADA1Q96BN2 335 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 PABPC5Q96DU9 382 aaKnown RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 CCDC126Q96EE4 140 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 YME1L1Q96TA2 773 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 CCDC106Q9BWC9 280 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 CADM1Q9BY67 442 aaKnown RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 ILKAPQ9H0C8 392 aaPredicted RBP14.15□□□□□ -0.14
USF1-202ENST00000368020 CWH43Q9H720 699 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 DCLRE1BQ9H816 532 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 MRGBPQ9NV56 204 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 NUMBLQ9Y6R0 609 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 SLC38A8A6NNN8 435 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 ITM2AO43736 263 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 HLA-DPA1P20036 260 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 OR1E1P30953 314 aa14.15□□□□□ -0.14
USF1-202ENST00000368020 ATP5C1P36542 298 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms