RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PAPSS1O43252 624 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DGKIO75912 1065 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GPR89BP0CG08 455 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 OAFQ86UD1 273 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CDH9Q9ULB4 789 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SALL1Q9NSC2 1324 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 HEATR9A2RTY3 570 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 J3QR89 54 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF263O14978 683 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PIAS1O75925 651 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TEAD4Q15561 434 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DDR2Q16832 855 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 EPS8L3Q8TE67 593 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 BARHL2Q9NY43 387 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLITRK5O94991 958 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MYCLP1P12525 358 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MSR1P21757 451 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DYNLL1P63167 89 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MRPS22P82650 360 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CAP1Q01518 475 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RAB41Q5JT25 222 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SDR16C5Q8N3Y7 309 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLC26A7Q8TE54 656 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CHP1Q99653 195 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TM9SF2Q99805 663 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLC9A8Q9Y2E8 581 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 A0A0G2JPF8 293 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 HNRNPCL3B7ZW38 293 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 EIF3FO00303 357 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PIGNO95427 931 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 HNRNPCL4P0DMR1 293 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RARBP10826 455 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TFDP3Q5H9I0 405 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MARK4Q96L34 752 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 XKR8Q9H6D3 395 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ADGRE2Q9UHX3 823 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 INPP4BO15327 924 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ADAM12O43184 909 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CDH13P55290 713 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 LIN52Q52LA3 116 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 KIAA1211LQ6NV74 962 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DHRS4L2Q6PKH6 230 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PRPF39Q86UA1 669 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PHC2Q8IXK0 858 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZBTB8BQ8NAP8 495 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLC7A6OSQ96CW6 309 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SFMBT1Q9UHJ3 866 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 FGF10O15520 208 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CD53P19397 219 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ATP5F1P24539 256 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PGAM4Q8N0Y7 254 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GDPD1Q8N9F7 314 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GLMNQ92990 594 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 SLC22A4Q9H015 551 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 INTS10Q9NVR2 710 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 USP20Q9Y2K6 914 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 A0A0G2JND7 137 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 HCN1O60741 890 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RHOBTB1O94844 696 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RAPGEF3O95398 923 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CXCR2P25025 360 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ILF3Q12906 894 aaKnown RBP eCLIP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZYXQ15942 572 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MB21D2Q8IYB1 491 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ARL6IP6Q8N6S5 226 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PIF1Q9H611 641 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RBM12Q9NTZ6 932 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PCDHB5Q9Y5E4 795 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 MAPK12P53778 367 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ATP5IP56385 69 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 KANK2Q63ZY3 851 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 METTL25Q8N6Q8 603 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TRIM2Q9C040 744 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 XPNPEP2O43895 674 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 BPGMP07738 259 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ZDHHC11BP0C7U3 371 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PLA2G4BP0C869 781 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 DEPDC1Q5TB30 811 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ARMC8Q8IUR7 673 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CMTM3Q96MX0 182 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 NEU2Q9Y3R4 380 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ME2P23368 584 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GRIK3Q13003 919 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 NSMFQ6X4W1 530 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 IFNEQ86WN2 208 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CAMKK1Q8N5S9 505 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RRNAD1Q96FB5 475 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 TRPC5Q9UL62 973 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ABCG2Q9UNQ0 655 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ATP6V1G2-DDX39BF2Z307 99 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 UBXN8O00124 270 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 KIAA0355O15063 1070 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 PLA2G6O60733 806 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 CYP3A4P08684 503 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 ARL1P40616 181 aaPredicted RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 NIPA2Q8N8Q9 360 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 LRRC40Q9H9A6 602 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 RBMX2Q9Y388 322 aaKnown RBP3.79□□□□□ -1.8
SYNE1-207ENST00000367255 GSTM3P21266 225 aa3.79□□□□□ -1.8
SYNE1-207ENST00000367255 UGT1A3P35503 534 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms