RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 PITRM1Q5JRX3 1037 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 DENND2CQ68D51 928 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 ZNF534Q76KX8 674 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 ELSPBP1Q96BH3 223 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 ZNF317Q96PQ6 595 aaPredicted RBP12.4□□□□□ -0.42
CAPN9-203ENST00000366666 RBM15Q96T37 977 aaKnown RBP eCLIP12.4□□□□□ -0.42
CAPN9-203ENST00000366666 STMN4Q9H169 189 aaPredicted RBP12.4□□□□□ -0.42
CAPN9-203ENST00000366666 CCDC134Q9H6E4 229 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 GLOD4Q9HC38 313 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 KIAA1522Q9P206 1035 aaPredicted RBP12.4□□□□□ -0.42
CAPN9-203ENST00000366666 IGSF9Q9P2J2 1179 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 FCF1Q9Y324 198 aaKnown RBP12.4□□□□□ -0.42
CAPN9-203ENST00000366666 MGRN1O60291 552 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 CACNG3O60359 315 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 TULP3O75386 442 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 NEBLO76041 1014 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 AGTP01019 485 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 MMP2P08253 660 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 CISD3P0C7P0 127 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 RENBPP51606 427 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 TFF2Q03403 129 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 ITKQ08881 620 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 BIRC2Q13490 618 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 HTR4Q13639 388 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 MORF4L2Q15014 288 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 ZNF783Q6ZMS7 281 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 KDELC2Q7Z4H8 507 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 PIGWQ7Z7B1 504 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 ADIPOR2Q86V24 386 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 ETFBKMTQ8IXQ9 262 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 DCAF4L2Q8NA75 395 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 NECTIN4Q96NY8 510 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 VAT1Q99536 393 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 APOL2Q9BQE5 337 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 WDR83Q9BRX9 315 aaKnown RBP12.4□□□□□ -0.42
CAPN9-203ENST00000366666 EPB41L4BQ9H329 900 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 UBA2Q9UBT2 640 aaPredicted RBP12.4□□□□□ -0.42
CAPN9-203ENST00000366666 TRHDEQ9UKU6 1024 aa12.4□□□□□ -0.42
CAPN9-203ENST00000366666 ARNTLO00327 626 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 PABPC1P11940 636 aaKnown RBP12.39□□□□□ -0.43
CAPN9-203ENST00000366666 SOX9P48436 509 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 TMCO4Q5TGY1 634 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 KCTD11Q693B1 232 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 PRPF39Q86UA1 669 aaKnown RBP12.39□□□□□ -0.43
CAPN9-203ENST00000366666 CAND1Q86VP6 1230 aaKnown RBP12.39□□□□□ -0.43
CAPN9-203ENST00000366666 ARRDC2Q8TBH0 407 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 ATP2A3Q93084 1043 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 FATE1Q969F0 183 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 FERMT1Q9BQL6 677 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 HAUS2Q9NVX0 235 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 EPS15L1Q9UBC2 864 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 FBXO10Q9UK96 956 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 SHOC2Q9UQ13 582 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 ANHXE9PGG2 379 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 CHADO15335 359 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 HOXC11O43248 304 aaPredicted RBP12.39□□□□□ -0.43
CAPN9-203ENST00000366666 TMCC1O94876 653 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 ADH1CP00326 375 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 EZRP15311 586 aaKnown RBP12.39□□□□□ -0.43
CAPN9-203ENST00000366666 CHN1P15882 459 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 MAGEA6P43360 314 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 RUNX3Q13761 415 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 AAK1Q2M2I8 961 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 TLDC1Q6P9B6 456 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 ZCCHC9Q8N567 271 aaKnown RBP12.39□□□□□ -0.43
CAPN9-203ENST00000366666 CYB5D2Q8WUJ1 264 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 SERPINB12Q96P63 405 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 TRIM56Q9BRZ2 755 aaKnown RBP12.39□□□□□ -0.43
CAPN9-203ENST00000366666 THG1LQ9NWX6 298 aaKnown RBP12.39□□□□□ -0.43
CAPN9-203ENST00000366666 MTRF1LQ9UGC7 380 aaKnown RBP12.39□□□□□ -0.43
CAPN9-203ENST00000366666 LIMD1Q9UGP4 676 aa12.39□□□□□ -0.43
CAPN9-203ENST00000366666 PRRT4C9JH25 899 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 RGS16O15492 202 aaPredicted RBP12.38□□□□□ -0.43
CAPN9-203ENST00000366666 PMPCBO75439 489 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 ECI2O75521 394 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 NFATC1O95644 943 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 PAX7P23759 505 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 FDFT1P37268 417 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 CD86P42081 329 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 PLK1P53350 603 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 KDSRQ06136 332 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 SMAD4Q13485 552 aaKnown RBP12.38□□□□□ -0.43
CAPN9-203ENST00000366666 ZNF235Q14590 738 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 SLMAPQ14BN4 828 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 SPRED3Q2MJR0 410 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 ATXN7L2Q5T6C5 722 aaPredicted RBP12.38□□□□□ -0.43
CAPN9-203ENST00000366666 IER5LQ5T953 404 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 IGDCC3Q8IVU1 814 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 CCDC117Q8IWD4 279 aaPredicted RBP12.38□□□□□ -0.43
CAPN9-203ENST00000366666 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 BBOF1Q8ND07 529 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 MDM1Q8TC05 714 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 ATXN2LQ8WWM7 1075 aaKnown RBP12.38□□□□□ -0.43
CAPN9-203ENST00000366666 HLA-CQ95604 372 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 NXPE3Q969Y0 559 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 IMP4Q96G21 291 aaKnown RBP12.38□□□□□ -0.43
CAPN9-203ENST00000366666 FCRL5Q96RD9 977 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 SH3GL3Q99963 347 aa12.38□□□□□ -0.43
CAPN9-203ENST00000366666 SEMA3CQ99985 751 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms