RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 ULK1O75385 1050 aa16.89■□□□□ 0.29
NID1-202ENST00000366595 AKAP3O75969 853 aa16.89■□□□□ 0.29
NID1-202ENST00000366595 FOSL2P15408 326 aa16.89■□□□□ 0.29
NID1-202ENST00000366595 SPIBQ01892 262 aa16.89■□□□□ 0.29
NID1-202ENST00000366595 USP45Q70EL2 814 aa16.89■□□□□ 0.29
NID1-202ENST00000366595 PSTKQ8IV42 348 aaKnown RBP16.89■□□□□ 0.29
NID1-202ENST00000366595 ZC3H7AQ8IWR0 971 aaKnown RBP16.89■□□□□ 0.29
NID1-202ENST00000366595 SMARCD1Q96GM5 515 aa16.89■□□□□ 0.29
NID1-202ENST00000366595 FAM153BP0C7A2 387 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 CKBP12277 381 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 PRKAR2AP13861 404 aaKnown RBP16.88■□□□□ 0.29
NID1-202ENST00000366595 SCN1BQ07699 218 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 FAM153CQ494X1 144 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.88■□□□□ 0.29
NID1-202ENST00000366595 HOPXQ9BPY8 73 aaPredicted RBP16.88■□□□□ 0.29
NID1-202ENST00000366595 SLC4A5Q9BY07 1137 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 MED28Q9H204 178 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 TSPAN16Q9UKR8 245 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 SNX7Q9UNH6 387 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 SLC25A12O75746 678 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 CCNYL3P0C7X3 344 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 FSCN1Q16658 493 aaKnown RBP16.88■□□□□ 0.29
NID1-202ENST00000366595 SULT1C3Q6IMI6 304 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 GCNT7Q6ZNI0 430 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 PTCHD4Q6ZW05 846 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 CHST15Q7LFX5 561 aaPredicted RBP16.88■□□□□ 0.29
NID1-202ENST00000366595 PIH1D2Q8WWB5 315 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 CELF6Q96J87 481 aaKnown RBP16.88■□□□□ 0.29
NID1-202ENST00000366595 CITED4Q96RK1 184 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 ASB7Q9H672 318 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 PCP4L1A6NKN8 68 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 MAP2K7O14733 419 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 EFR3AQ14156 821 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 LRRC38Q5VT99 294 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 KCNT2Q6UVM3 1135 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 GPR180Q86V85 440 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 BHLHE41Q9C0J9 482 aaPredicted RBP16.88■□□□□ 0.29
NID1-202ENST00000366595 PNPLA8Q9NP80 782 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 ETNK2Q9NVF9 386 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 UPB1Q9UBR1 384 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 SAMD4AQ9UPU9 718 aaKnown RBP16.88■□□□□ 0.29
NID1-202ENST00000366595 WRBO00258 174 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 OTCP00480 354 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 MMP13P45452 471 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 ATP13A5Q4VNC0 1218 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 SEPT12Q8IYM1 358 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 DAW1Q8N136 415 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 PTGR2Q8N8N7 351 aaPredicted RBP16.88■□□□□ 0.29
NID1-202ENST00000366595 ZSWIM2Q8NEG5 633 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 RASSF5Q8WWW0 418 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 NDOR1Q9UHB4 597 aa16.88■□□□□ 0.29
NID1-202ENST00000366595 C2CD2LO14523 706 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 ERCC2P18074 760 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 SERPINA4P29622 427 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 NAGLUP54802 743 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 PFKFB4Q16877 469 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 GPALPP1Q8IXQ4 340 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 PTCD2Q8WV60 388 aaKnown RBP16.87■□□□□ 0.29
NID1-202ENST00000366595 THG1LQ9NWX6 298 aaKnown RBP16.87■□□□□ 0.29
NID1-202ENST00000366595 DNPEPQ9ULA0 475 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 SLC12A4Q9UP95 1085 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 FAM237BA0A1B0GVD1 139 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 TRAFD1O14545 582 aaPredicted RBP16.87■□□□□ 0.29
NID1-202ENST00000366595 SUV39H1O43463 412 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 CYP2B6P20813 491 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 THPOP40225 353 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 SLC6A3Q01959 620 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 ACOX1Q15067 660 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 LCN1P1Q5VSP4 162 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 FAM117BQ6P1L5 589 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 SAPCD2Q86UD0 394 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 IQCF2Q8IXL9 164 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 BTBD9Q96Q07 612 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 DNAJC18Q9H819 358 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 CDC42BPGQ6DT37 1551 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 FAM86C2PA6NEL3 165 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 G3V2T6 193 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 RPL9P32969 192 aaKnown RBP16.87■□□□□ 0.29
NID1-202ENST00000366595 ATP6V0D1P61421 351 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 EGFLAMQ63HQ2 1017 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 C12orf4Q9NQ89 552 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 NECTIN3Q9NQS3 549 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 CLUHO75153 1309 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 A0A0A0MRY4 1105 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 KMOO15229 486 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 PLK1P53350 603 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 RFTN2Q52LD8 501 aaPredicted RBP16.87■□□□□ 0.29
NID1-202ENST00000366595 FNBP1LQ5T0N5 605 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 SPATA13Q96N96 652 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 TRIM2Q9C040 744 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 ALG9Q9H6U8 611 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 TRPS1Q9UHF7 1281 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 PLIN3O60664 434 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 ZNF432O94892 652 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 NTRK1P04629 796 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 AMPD1P23109 780 aa16.87■□□□□ 0.29
NID1-202ENST00000366595 TDRD1Q9BXT4 1180 aaKnown RBP16.87■□□□□ 0.29
NID1-202ENST00000366595 UXTQ9UBK9 157 aaPredicted RBP16.87■□□□□ 0.29
NID1-202ENST00000366595 PSMD13Q9UNM6 376 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms