RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 C12orf40Q86WS4 652 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SFTPA1Q8IWL2 248 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 IFT20Q8IY31 132 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 APCDD1Q8J025 514 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ZNF567Q8N184 647 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 TERB1Q8NA31 727 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 USP33Q8TEY7 942 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 UCMAQ8WVF2 138 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SEC14L1Q92503 715 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 EZH1Q92800 747 aaPredicted RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ALG14Q96F25 216 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 MSANTD3Q96H12 275 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SNF8Q96H20 258 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 LMLNQ96KR4 655 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 TEKT5Q96M29 485 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 AGAP3Q96P47 875 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 HHIPQ96QV1 700 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 MGME1Q9BQP7 344 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 CEP41Q9BYV8 373 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 TRIM31Q9BZY9 425 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 CIPCQ9C0C6 399 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 POLR1EQ9GZS1 481 aaKnown RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 DPH5Q9H2P9 285 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 C8orf33Q9H7E9 229 aaPredicted RBP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 ZDHHC4Q9NPG8 344 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 TRPV5Q9NQA5 729 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 FSCN3Q9NQT6 498 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 RAB6BQ9NRW1 208 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 FAM114A2Q9NRY5 505 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 RBM22Q9NW64 420 aaKnown RBP eCLIP6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 WHRNQ9P202 907 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 FBXO10Q9UK96 956 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SLC8A2Q9UPR5 921 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SHOC2Q9UQ13 582 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 SLC27A6Q9Y2P4 619 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 NEU2Q9Y3R4 380 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 OR51B4Q9Y5P0 310 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 MYOFQ9NZM1 2061 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 CHD5Q8TDI0 1954 aa6.88□□□□□ -1.31
RNU1-55P-201ENST00000365510 NYNRINQ9P2P1 1898 aaKnown RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ESYT3A0FGR9 886 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 C4orf47A7E2U8 309 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ERI2A8K979 691 aaKnown RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 SMAPO00193 183 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 DNALI1O14645 258 aaPredicted RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 TIMM44O43615 452 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ZMPSTE24O75844 475 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 SEC31AO94979 1220 aaKnown RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 KCNK5O95279 499 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 APODP05090 189 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 APRTP07741 180 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 DLDP09622 509 aaKnown RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ZSCAN5DPP0CG00 497 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ETS1P14921 441 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 PSMB4P28070 264 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 TNFRSF8P28908 595 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 PMLP29590 882 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 RPL22P35268 128 aaKnown RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 NNMTP40261 264 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 GRIA2P42262 883 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 MAGEA9P43362 315 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 TNNT3P45378 269 aaPredicted RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 MAPK8P45983 427 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 RPL21P46778 160 aaKnown RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 NRLP54845 237 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 DRG2P55039 364 aaKnown RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 RHOAP61586 193 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ST8SIA6P61647 398 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ECT2LQ008S8 904 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 CAV1Q03135 178 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ITKQ08881 620 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 SLC10A7Q0GE19 358 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 SEMA5AQ13591 1074 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 HLTFQ14527 1009 aaKnown RBP eCLIP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 MORF4L2Q15014 288 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 GEN1Q17RS7 908 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 PARP6Q2NL67 630 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 GAB4Q2WGN9 574 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 MAP9Q49MG5 647 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 INO80DQ53TQ3 878 aaPredicted RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 IZUMO3Q5VZ72 239 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 LINGO4Q6UY18 593 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 LEKR1Q6ZMV7 388 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 PID1Q7Z2X4 250 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 KIAA0907Q7Z7F0 614 aaPredicted RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 PRUNE1Q86TP1 453 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ADIPOR2Q86V24 386 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 HOOK3Q86VS8 718 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 PPIL6Q8IXY8 311 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 DEFB119Q8N690 84 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 TEX26Q8N6G2 289 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ATP11CQ8NB49 1132 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 GLIS1Q8NBF1 620 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 NETO1Q8TDF5 533 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 TTC17Q96AE7 1141 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 ZNF419Q96HQ0 510 aaPredicted RBP6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 PSKH2Q96QS6 385 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 PNKPQ96T60 521 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 IL12RB2Q99665 862 aa6.87□□□□□ -1.31
RNU1-55P-201ENST00000365510 CEP44Q9C0F1 390 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms