RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 MAPKAPK2P49137 400 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 NEK3P51956 506 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 VAC14Q08AM6 782 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 IL27RAQ6UWB1 636 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 FAM43BQ6ZT52 329 aaPredicted RBP13.59□□□□□ -0.23
LDB3-202ENST00000361373 CYP4Z2PQ8N1L4 340 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 ZFP28Q8NHY6 868 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 USP6NLQ92738 828 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 C10orf88Q9H8K7 445 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 COQ4Q9Y3A0 265 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 LRRC37A3O60309 1634 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 LCA5LO95447 670 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 DNTTP04053 509 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 NTSP30990 170 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 MARCKSL1P49006 195 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 ACLYP53396 1101 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 CCDC157Q569K6 752 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 INTS11Q5TA45 600 aaKnown RBP13.59□□□□□ -0.23
LDB3-202ENST00000361373 DEPDC1Q5TB30 811 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 CYP20A1Q6UW02 462 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 MON1BQ7L1V2 547 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 MAB21L3Q8N8X9 362 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 ZFYVE19Q96K21 471 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 CAAP1Q9H8G2 361 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 GMIPQ9P107 970 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 AP4S1Q9Y587 144 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 CACNB4O00305 520 aaPredicted RBP13.59□□□□□ -0.23
LDB3-202ENST00000361373 CCR3P51677 355 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 ELP6Q0PNE2 266 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 PFKFB4Q16877 469 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 AADACL2Q6P093 401 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 DHFR2Q86XF0 187 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 RASGEF1CQ8N431 466 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 DQX1Q8TE96 717 aaKnown RBP13.59□□□□□ -0.23
LDB3-202ENST00000361373 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 NKD2Q969F2 451 aaPredicted RBP13.59□□□□□ -0.23
LDB3-202ENST00000361373 TRMOQ9BU70 441 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 UNKQ9C0B0 810 aaKnown RBP13.59□□□□□ -0.23
LDB3-202ENST00000361373 ASB3Q9Y575 518 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 PCDHB9Q9Y5E1 797 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 FAM208AQ9UK61 1670 aaKnown RBP13.59□□□□□ -0.23
LDB3-202ENST00000361373 RCCD1A6NED2 376 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 ME2P23368 584 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 SLC20A2Q08357 652 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 CRHR2Q13324 411 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 LLGL2Q6P1M3 1020 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 ZBTB10Q96DT7 871 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 BTBD10Q9BSF8 475 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 MAGEH1Q9H213 219 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 BRD9Q9H8M2 597 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 FBXO6Q9NRD1 293 aaPredicted RBP13.59□□□□□ -0.23
LDB3-202ENST00000361373 SRRDQ9UH36 339 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 SLC27A6Q9Y2P4 619 aa13.59□□□□□ -0.23
LDB3-202ENST00000361373 GCATO75600 419 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 PSMC3P17980 439 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 TFEBP19484 476 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 ATP6V1B2P21281 511 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 CCNCP24863 283 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 CLCNKBP51801 687 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 NAGLUP54802 743 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 CERS6Q6ZMG9 384 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 ZBTB49Q6ZSB9 765 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 PTGR2Q8N8N7 351 aaPredicted RBP13.58□□□□□ -0.23
LDB3-202ENST00000361373 CKAP2Q8WWK9 683 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 MYO19Q96H55 970 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 GAS2L1Q99501 681 aaPredicted RBP13.58□□□□□ -0.23
LDB3-202ENST00000361373 SNX8Q9Y5X2 465 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 DUOX1Q9NRD9 1551 aa13.58□□□□□ -0.23
LDB3-202ENST00000361373 BCLAF3A2AJT9 711 aaKnown RBP13.58□□□□□ -0.24
LDB3-202ENST00000361373 WDR47O94967 919 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 MT-CO1P00395 513 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 OTCP00480 354 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 AMD1P17707 334 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 RIPOR1Q6ZS17 1223 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 KRT73Q86Y46 540 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 ATG16L2Q8NAA4 619 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 KCTD5Q9NXV2 234 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 PCDHB1Q9Y5F3 818 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 KCNE2Q9Y6J6 123 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 A0A1B0GVM2 712 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 MAGEA13PA6NCF6 341 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 TCAF2A6NFQ2 919 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 A8MX80 341 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 ELFN1P0C7U0 828 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 TACR2P21452 398 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 CORO1AP31146 461 aaKnown RBP13.58□□□□□ -0.24
LDB3-202ENST00000361373 IFNGR2P38484 337 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 CENPAP49450 140 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 SLC16A1P53985 500 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 CRYMQ14894 314 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 TBCELQ5QJ74 424 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 BHLHB9Q6PI77 547 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 AADATQ8N5Z0 425 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 ACSL4O60488 711 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 ITGA2BP08514 1039 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 SLC35G4P0C7Q5 338 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 CDH4P55283 916 aa13.58□□□□□ -0.24
LDB3-202ENST00000361373 AUHQ13825 339 aaKnown RBP13.58□□□□□ -0.24
LDB3-202ENST00000361373 SLC10A6Q3KNW5 377 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms