RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 CMTM5Q96DZ9 223 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TNIP3Q96KP6 325 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 CDRT15Q96T59 188 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 LGMNQ99538 433 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 CNPY3Q9BT09 278 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 NRDE2Q9H7Z3 1164 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 PTTG2Q9NZH5 202 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 DAPK2Q9UIK4 370 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 SORCS3Q9UPU3 1222 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 GNEQ9Y223 722 aaKnown RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 TAF4O00268 1085 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 F2P00734 622 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 CRYBB1P53674 252 aaPredicted RBP9.22□□□□□ -0.93
TOP1-201ENST00000361337 EMP3P54852 163 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 NIPAL4Q0D2K0 466 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 CEACAM7Q14002 265 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TIFABQ6ZNK6 161 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 ZNF410Q86VK4 478 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 PYROXD2Q8N2H3 581 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 GIPC2Q8TF65 315 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 ARNTL2Q8WYA1 636 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 OMA1Q96E52 524 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 TSNARE1Q96NA8 513 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 KLHL32Q96NJ5 620 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 AGAP3Q96P47 875 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 APOL5Q9BWW9 433 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 RHOBTB2Q9BYZ6 727 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 DNAJC28Q9NX36 388 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 RIMS3Q9UJD0 308 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 PRELID1Q9Y255 219 aa9.22□□□□□ -0.93
TOP1-201ENST00000361337 BCLAF3A2AJT9 711 aaKnown RBP9.21□□□□□ -0.93
TOP1-201ENST00000361337 DENRO43583 198 aaKnown RBP9.21□□□□□ -0.93
TOP1-201ENST00000361337 GABBR2O75899 941 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 ESRRBO95718 433 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 PFKMP08237 780 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 CYP2F1P24903 491 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 EPHA3P29320 983 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 MAGEA6P43360 314 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 C21orf59P57076 290 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 NEDD8Q15843 81 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 PPP1R26Q5T8A7 1209 aaPredicted RBP9.21□□□□□ -0.93
TOP1-201ENST00000361337 SLC9A4Q6AI14 798 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 TMEM53Q6P2H8 277 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 TP53INP2Q8IXH6 220 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 RBM12BQ8IXT5 1001 aaKnown RBP9.21□□□□□ -0.93
TOP1-201ENST00000361337 CLEC4CQ8WTT0 213 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 HPS1Q92902 700 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 BTBD9Q96Q07 612 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.21□□□□□ -0.93
TOP1-201ENST00000361337 FZD8Q9H461 694 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 SMPD4Q9NXE4 827 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 PSMD13Q9UNM6 376 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 F8W810 466 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 MPSTP25325 297 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 OCA2Q04671 838 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 ADIGQ0VDE8 80 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 PMF1Q6P1K2 205 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 ZBTB8BQ8NAP8 495 aaPredicted RBP9.21□□□□□ -0.93
TOP1-201ENST00000361337 MCUQ8NE86 351 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 CYGBQ8WWM9 190 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 GAB3Q8WWW8 586 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 KHSRPQ92945 711 aaKnown RBP eCLIP9.21□□□□□ -0.931e-8■■■□□ 14.9
TOP1-201ENST00000361337 TMEM169Q96HH4 297 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 BCO2Q9BYV7 579 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 TMPRSS4Q9NRS4 437 aa9.21□□□□□ -0.93
TOP1-201ENST00000361337 MCM3APO60318 1980 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 SMIM35A0A1B0GVV1 85 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 GLRA3O75311 464 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 USP12O75317 370 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 CILPO75339 1184 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 TYK2P29597 1187 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 HDAC4P56524 1084 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 CDC42EP1Q00587 391 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 PLOD1Q02809 727 aaPredicted RBP9.21□□□□□ -0.94
TOP1-201ENST00000361337 BTG3Q14201 252 aaPredicted RBP9.21□□□□□ -0.94
TOP1-201ENST00000361337 SV2CQ496J9 727 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 CTXN3Q4LDR2 81 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 OVOS1Q6IE37 1185 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 EPGNQ6UW88 154 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 DSELQ8IZU8 1212 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 ATAD1Q8NBU5 361 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 BHLHE22Q8NFJ8 381 aaPredicted RBP9.21□□□□□ -0.94
TOP1-201ENST00000361337 KBTBD7Q8WVZ9 684 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 RCN3Q96D15 328 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 AGAP2Q99490 1192 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 SPON2Q9BUD6 331 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 EPB41L1Q9H4G0 881 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 ASB7Q9H672 318 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 GID8Q9NWU2 228 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 SYBUQ9NX95 663 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 GJD2Q9UKL4 321 aa9.21□□□□□ -0.94
TOP1-201ENST00000361337 PTPRZ1P23471 2315 aaPredicted RBP9.2□□□□□ -0.94
TOP1-201ENST00000361337 CCDC85CA6NKD9 419 aa9.2□□□□□ -0.94
TOP1-201ENST00000361337 CAPN1P07384 714 aa9.2□□□□□ -0.94
TOP1-201ENST00000361337 USP17L7P0C7H9 530 aa9.2□□□□□ -0.94
TOP1-201ENST00000361337 CCDC159P0C7I6 412 aa9.2□□□□□ -0.94
TOP1-201ENST00000361337 CPA3P15088 417 aa9.2□□□□□ -0.94
TOP1-201ENST00000361337 HARS2P49590 506 aaKnown RBP9.2□□□□□ -0.94
TOP1-201ENST00000361337 AP3M2P53677 418 aa9.2□□□□□ -0.94
TOP1-201ENST00000361337 XIAPP98170 497 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms