RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 TP53INP2Q8IXH6 220 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 PQLC1Q8N2U9 271 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 TMEM151AQ8N4L1 468 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 ZNF689Q96CS4 500 aaPredicted RBP12.57□□□□□ -0.4
UBA3-202ENST00000361055 AGAP3Q96P47 875 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 IL22Q9GZX6 179 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 GBA3Q9H227 469 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 EPB41L1Q9H4G0 881 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 LRRC4Q9HBW1 653 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 PIGVQ9NUD9 493 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 TLK1Q9UKI8 766 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 COMMD3-BMI1R4GMX3 469 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 COL4A6Q14031 1691 aa12.57□□□□□ -0.4
UBA3-202ENST00000361055 SMIM31A0A1B0GVY4 71 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 E2F8A0AVK6 867 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 FBXO21O94952 628 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 ALDH2P05091 517 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 COL6A2P12110 1019 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 NPR3P17342 541 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 POLD2P49005 469 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 ZNF135P52742 658 aaPredicted RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 IRF9Q00978 393 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 PRKAA1Q13131 559 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 NME3Q13232 169 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 OLIG2Q13516 323 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 PEX6Q13608 980 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 HERC3Q15034 1050 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 ANO4Q32M45 955 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 PAN2Q504Q3 1202 aaKnown RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 CERCAMQ5T4B2 595 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 LIPMQ5VYY2 423 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 SEL1L3Q68CR1 1132 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 UGT2A3Q6UWM9 527 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 HIPK4Q8NE63 616 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 MFSD3Q96ES6 412 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 VPS39Q96JC1 886 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 SENP8Q96LD8 212 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 HAPLN3Q96S86 360 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 GPR22Q99680 433 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 TMEM175Q9BSA9 504 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 ACE2Q9BYF1 805 aaPredicted RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 CAB39LQ9H9S4 337 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 C20orf96Q9NUD7 363 aaPredicted RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 FBXW11Q9UKB1 542 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 DTNAQ9Y4J8 743 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 SYNJ2BP-COX16A0A087WUM0 186 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 FAM72CH0Y354 149 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 AIM2O14862 343 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 GRID2O43424 1007 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 USP12O75317 370 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 LTFP02788 710 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 PTPN1P18031 435 aaKnown RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 IGFBP6P24592 240 aaPredicted RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 CD68P34810 354 aaPredicted RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 NDUFV1P49821 464 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 CYLC2Q14093 348 aaPredicted RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 DLG2Q15700 870 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 LSM12Q3MHD2 195 aaKnown RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 FAM72AQ5TYM5 149 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 FAM72DQ6L9T8 149 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 PAQR9Q6ZVX9 377 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 FAM72BQ86X60 149 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 DSELQ8IZU8 1212 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 MARVELD2Q8N4S9 558 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 EFCAB3Q8N7B9 438 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 HERVK_113Q902F9 699 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 HDAC11Q96DB2 347 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 ATXN7L3BQ96GX2 97 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 MLPHQ9BV36 600 aaPredicted RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 C1QTNF1Q9BXJ1 281 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 ZNF385DQ9H6B1 395 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 RC3H2Q9HBD1 1191 aaKnown RBP12.56□□□□□ -0.4
UBA3-202ENST00000361055 CHRAC1Q9NRG0 131 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 COX16Q9P0S2 106 aa12.56□□□□□ -0.4
UBA3-202ENST00000361055 TSC2P49815 1807 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 NRP1O14786 923 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 ATP9BO43861 1147 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 FYNP06241 537 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 SERPINB5P36952 375 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 GRIA4P48058 902 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 SMAD1Q15797 465 aaKnown RBP12.55□□□□□ -0.4
UBA3-202ENST00000361055 ZNF423Q2M1K9 1284 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 TIGD5Q53EQ6 642 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 CD300LGQ6UXG3 332 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 TMCO2Q7Z6W1 182 aaPredicted RBP12.55□□□□□ -0.4
UBA3-202ENST00000361055 OSTM1Q86WC4 334 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 SIX6OS1Q8N1H7 587 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 TMEM86AQ8N2M4 240 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 CATSPER1Q8NEC5 780 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 HASPINQ8TF76 798 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 PDCD6IPQ8WUM4 868 aaKnown RBP12.55□□□□□ -0.4
UBA3-202ENST00000361055 PGAP3Q96FM1 320 aaPredicted RBP12.55□□□□□ -0.4
UBA3-202ENST00000361055 TSNARE1Q96NA8 513 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 CDRT15Q96T59 188 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 KIFC1Q9BW19 673 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 Q9H521 79 aa12.55□□□□□ -0.4
UBA3-202ENST00000361055 WDR55Q9H6Y2 383 aaPredicted RBP12.55□□□□□ -0.4
UBA3-202ENST00000361055 WDR6Q9NNW5 1121 aaKnown RBP12.55□□□□□ -0.4
UBA3-202ENST00000361055 IARS2Q9NSE4 1012 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms