RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 METTL18O95568 372 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 SNRPAP09012 282 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 TPBGLP0DKB5 382 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 PAPOLAP51003 745 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 YBEYP58557 167 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 CDK16Q00536 496 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 OVGP1Q12889 678 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 POLD3Q15054 466 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 CTC1Q2NKJ3 1217 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 TEX44Q53QW1 395 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 PRSS36Q5K4E3 855 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 OR52K2Q8NGK3 314 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 ZSCAN18Q8TBC5 510 aaPredicted RBP13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 TTC17Q96AE7 1141 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 TIFAQ96CG3 184 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 NAF1Q96HR8 494 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 PRKD2Q9BZL6 878 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 CDH22Q9UJ99 828 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 ZNF180Q9UJW8 692 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 SH3BP1Q9Y3L3 701 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 F5H423 210 aaPredicted RBP13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 MATN3O15232 486 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 CLDN11O75508 207 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 PYGBP11216 843 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 TPSB2P20231 275 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 ETV4P43268 484 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 MAGEA6P43360 314 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 CDH4P55283 916 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 SEMA5AQ13591 1074 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 KRT72Q14CN4 511 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 TPSAB1Q15661 275 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 PARP15Q460N3 678 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 GPR158Q5T848 1215 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 Q6ZNB5 142 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 LRRC6Q86X45 466 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 PPP2R3CQ969Q6 453 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 LRRC39Q96DD0 335 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 FAM111AQ96PZ2 611 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 PIDD1Q9HB75 910 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 IGSF9Q9P2J2 1179 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 IPO11Q9UI26 975 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 ZFP37Q9Y6Q3 630 aaPredicted RBP13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 PRRC2BQ5JSZ5 2229 aaKnown RBP13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 SOBPA7XYQ1 873 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 ZNF197O14709 1029 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 GYG2O15488 501 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 TSPAN3O60637 253 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 MAFKO60675 156 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 JCHAINP01591 159 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 AVPR1AP37288 418 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 ZBTB17Q13105 803 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 PRPSAP1Q14558 356 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 TSNAXIP1Q2TAA8 658 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 CMPK2Q5EBM0 449 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 ATG16L1Q676U5 607 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 TMC5Q6UXY8 1006 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 IGDCC3Q8IVU1 814 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.34□□□□□ -0.273e-9■■■□□ 18.1
SQSTM1-201ENST00000360718 ARHGAP24Q8N264 748 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 SERAC1Q96JX3 654 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 ZSWIM3Q96MP5 696 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 AGAP3Q96P47 875 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 TMEM120AQ9BXJ8 343 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 PRO3102Q9H379 93 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 SP110Q9HB58 689 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 NKX1-2Q9UD57 310 aaPredicted RBP13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 ZMYM5Q9UJ78 669 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 STOML2Q9UJZ1 356 aa13.34□□□□□ -0.27
SQSTM1-201ENST00000360718 NUP210Q8TEM1 1887 aaPredicted RBP13.33□□□□□ -0.27
SQSTM1-201ENST00000360718 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 A0A1B0GVM2 712 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 TCAF2A6NFQ2 919 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 CLGNO14967 610 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 PIAS1O75925 651 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 GLP2RO95838 553 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 POU2F2P09086 479 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 PSMB4P28070 264 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 SERPINB4P48594 390 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 ZNF177Q13360 481 aaPredicted RBP13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 ZRSR2Q15696 482 aaKnown RBP13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 SH2D5Q6ZV89 423 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 CHST9Q7L1S5 443 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 CTAGE3PQ8IX95 158 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 LMNTD2Q8IXW0 634 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 MCUQ8NE86 351 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 KCNV2Q8TDN2 545 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 ING5Q8WYH8 240 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 MTBPQ96DY7 904 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 HMCESQ96FZ2 354 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 IGFLR1Q9H665 355 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 DENND2DQ9H6A0 471 aaPredicted RBP13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 CFAP97Q9P2B7 532 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 STOML1Q9UBI4 398 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 ZC3H7BQ9UGR2 993 aaKnown RBP13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 MYOFQ9NZM1 2061 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 LINC01565O15544 149 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 ZBTB24O43167 697 aaPredicted RBP13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 KRT38O76015 456 aa13.33□□□□□ -0.28
SQSTM1-201ENST00000360718 ESRRAP11474 423 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms