RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 ITGB1P05556 798 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 NELFEP18615 380 aaKnown RBP20.67■□□□□ 0.9
COL13A1-202ENST00000357811 FGFR3P22607 806 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 NME5P56597 212 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 PCID2Q5JVF3 399 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 C6orf52Q5T4I8 152 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 DENND5AQ6IQ26 1287 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 TRIM67Q6ZTA4 783 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 ADGRG6Q86SQ4 1221 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 ARHGAP12Q8IWW6 846 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 FCRL2Q96LA5 508 aaPredicted RBP20.67■□□□□ 0.9
COL13A1-202ENST00000357811 SPON1Q9HCB6 807 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 CCDC167Q9P0B6 97 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 C15orf38-AP3S2A0A0A6YYH1 394 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 ARPINQ7Z6K5 226 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 SH3RF2Q8TEC5 729 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 TRAPPC9Q96Q05 1148 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 GLOD4Q9HC38 313 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 CCDC160A6NGH7 325 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 HNRNPDQ14103 355 aaKnown RBP20.67■□□□□ 0.9
COL13A1-202ENST00000357811 ZNF423Q2M1K9 1284 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 RAB41Q5JT25 222 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 METTL21CQ5VZV1 264 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 C14orf80Q86SX3 495 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 KDM1BQ8NB78 822 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 KLHL32Q96NJ5 620 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 PKP2Q99959 881 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 SPATA16Q9BXB7 569 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 OSBPL2Q9H1P3 480 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 VCX3BQ9H321 246 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 UBAP1Q9NZ09 502 aa20.67■□□□□ 0.9
COL13A1-202ENST00000357811 OR51F1A6NGY5 319 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 C9JVG2 144 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 TRPA1O75762 1119 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 F9P00740 461 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 ROR2Q01974 943 aaKnown RBP20.66■□□□□ 0.9
COL13A1-202ENST00000357811 NRF1Q16656 503 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 DCLRE1AQ6PJP8 1040 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 C16orf89Q6UX73 402 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 CXCL17Q6UXB2 119 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 SCN4BQ8IWT1 228 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 RYBPQ8N488 228 aaPredicted RBP20.66■□□□□ 0.9
COL13A1-202ENST00000357811 PPHLN1Q8NEY8 458 aaKnown RBP20.66■□□□□ 0.9
COL13A1-202ENST00000357811 OR10T2Q8NGX3 314 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 CASP10Q92851 521 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 GPR78Q96P69 363 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 SLC39A3Q9BRY0 314 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 GMPR2Q9P2T1 348 aaKnown RBP20.66■□□□□ 0.9
COL13A1-202ENST00000357811 MAFKO60675 156 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 DNAJA2O60884 412 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 PITRM1Q5JRX3 1037 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 CLEC6AQ6EIG7 209 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 CYP2R1Q6VVX0 501 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 AGMOQ6ZNB7 445 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 USP50Q70EL3 339 aaPredicted RBP20.66■□□□□ 0.9
COL13A1-202ENST00000357811 OR9I1Q8NGQ6 314 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 RP9Q8TA86 221 aaKnown RBP20.66■□□□□ 0.9
COL13A1-202ENST00000357811 SERPINI1Q99574 410 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 OLFM1Q99784 485 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 AP5M1Q9H0R1 490 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 TRPC7Q9HCX4 862 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 FBXO5Q9UKT4 447 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 PSMD13Q9UNM6 376 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 RALGAPA2Q2PPJ7 1873 aa20.66■□□□□ 0.9
COL13A1-202ENST00000357811 GJB3O75712 270 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 ARCN1P48444 511 aaKnown RBP20.65■□□□□ 0.9
COL13A1-202ENST00000357811 HCAR3P49019 387 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 PIGGQ5H8A4 983 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 GPR152Q8TDT2 470 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 PABPC5Q96DU9 382 aaKnown RBP20.65■□□□□ 0.9
COL13A1-202ENST00000357811 VAT1Q99536 393 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 AAR2Q9Y312 384 aaKnown RBP20.65■□□□□ 0.9
COL13A1-202ENST00000357811 TARM1B6A8C7 271 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 PEX1O43933 1283 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 SLC4A1P02730 911 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 PM20D1Q6GTS8 502 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 LINC00523Q86TU6 105 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 OR6P1Q8NGX9 317 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 ATP6V1E2Q96A05 226 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 CENPKQ9BS16 269 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 AGO3Q9H9G7 860 aaKnown RBP20.65■□□□□ 0.9
COL13A1-202ENST00000357811 PRDM16Q9HAZ2 1276 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 ZBTB26Q9HCK0 441 aa20.65■□□□□ 0.9
COL13A1-202ENST00000357811 ZNF865P0CJ78 1059 aaPredicted RBP20.64■□□□□ 0.9
COL13A1-202ENST00000357811 SOX11P35716 441 aa20.64■□□□□ 0.9
COL13A1-202ENST00000357811 C1QTNF8P60827 252 aa20.64■□□□□ 0.9
COL13A1-202ENST00000357811 NSUN2Q08J23 767 aaKnown RBP eCLIP20.64■□□□□ 0.9
COL13A1-202ENST00000357811 PTPRCAPQ14761 206 aa20.64■□□□□ 0.9
COL13A1-202ENST00000357811 FBXO48Q5FWF7 155 aa20.64■□□□□ 0.9
COL13A1-202ENST00000357811 ARHGEF38Q9NXL2 777 aa20.64■□□□□ 0.9
COL13A1-202ENST00000357811 CDH9Q9ULB4 789 aa20.64■□□□□ 0.9
COL13A1-202ENST00000357811 A0A1B0GTW7 788 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 TCAF2A6NFQ2 919 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 SPATA31D3P0C874 917 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 CCDC166P0CW27 439 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 GRIK1P39086 918 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 CHN2P52757 468 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 PTK2BQ14289 1009 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 NEPROQ6NW34 567 aa20.64■□□□□ 0.89
COL13A1-202ENST00000357811 SPATA31D4Q6ZUB0 917 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms