RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SYNPOQ8N3V7 929 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 CCDC26Q8TAB7 109 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 TADA1Q96BN2 335 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 TRIM31Q9BZY9 425 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 SLC6A17Q9H1V8 727 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 RAB6BQ9NRW1 208 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 SUN2Q9UH99 717 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 SARDHQ9UL12 918 aa25.69■■□□□ 1.7
SSBP3-202ENST00000357475 TARSL2A2RTX5 802 aaKnown RBP25.68■■□□□ 1.7
SSBP3-202ENST00000357475 IVDP26440 423 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 CSNK1DP48730 415 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 METAP1P53582 386 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 PARP6Q2NL67 630 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 SDE2Q6IQ49 451 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 TRMT11Q7Z4G4 463 aaKnown RBP25.68■■□□□ 1.7
SSBP3-202ENST00000357475 CACUL1Q86Y37 369 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 CAMK1DQ8IU85 385 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 PLPP6Q8IY26 295 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 OSBPL6Q9BZF3 934 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 ASIC3Q9UHC3 531 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 PCDHGC4Q9Y5F7 938 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 ALADP13716 330 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 ACTN2P35609 894 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 RECQLP46063 649 aaPredicted RBP25.68■■□□□ 1.7
SSBP3-202ENST00000357475 TRAF2Q12933 501 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 TRADDQ15628 312 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 POM121L1PQ3SYA9 428 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 ARSIQ5FYB1 569 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 MAATS1Q7Z4T9 603 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 HEPHQ9BQS7 1158 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 IL36AQ9UHA7 158 aa25.68■■□□□ 1.7
SSBP3-202ENST00000357475 TCRBV7S3A2A0A539 114 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 FAM187AA6NFU0 413 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 CHURC1-FNTBB4DL54 471 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 SYNCRIPO60506 623 aaKnown RBP25.67■■□□□ 1.7
SSBP3-202ENST00000357475 PMPCBO75439 489 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 LEFTY1O75610 366 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 SLU7O95391 586 aaKnown RBP25.67■■□□□ 1.7
SSBP3-202ENST00000357475 SLC34A2O95436 690 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 POP4O95707 220 aaKnown RBP25.67■■□□□ 1.7
SSBP3-202ENST00000357475 COPAP53621 1224 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 SPARCL1Q14515 664 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 PCSK7Q16549 785 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 EOGTQ5NDL2 527 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 KDELC1Q6UW63 502 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 SYDE1Q6ZW31 735 aaPredicted RBP25.67■■□□□ 1.7
SSBP3-202ENST00000357475 KDELC2Q7Z4H8 507 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 CHRDQ9H2X0 955 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 DLGAP2Q9P1A6 1054 aa25.67■■□□□ 1.7
SSBP3-202ENST00000357475 ADCY8P40145 1251 aa25.66■■□□□ 1.7
SSBP3-202ENST00000357475 AP1S1P61966 158 aa25.66■■□□□ 1.7
SSBP3-202ENST00000357475 BASP1P80723 227 aaKnown RBP25.66■■□□□ 1.7
SSBP3-202ENST00000357475 ELAVL3Q14576 367 aaKnown RBP25.66■■□□□ 1.7
SSBP3-202ENST00000357475 E2F5Q15329 346 aa25.66■■□□□ 1.7
SSBP3-202ENST00000357475 CRY1Q16526 586 aa25.66■■□□□ 1.7
SSBP3-202ENST00000357475 HSF5Q4G112 596 aaPredicted RBP25.66■■□□□ 1.7
SSBP3-202ENST00000357475 MMAAQ8IVH4 418 aaKnown RBP25.66■■□□□ 1.7
SSBP3-202ENST00000357475 OR8D1Q8WZ84 308 aa25.66■■□□□ 1.7
SSBP3-202ENST00000357475 MKRN2Q9H000 416 aaKnown RBP25.66■■□□□ 1.7
SSBP3-202ENST00000357475 EPHX3Q9H6B9 360 aa25.66■■□□□ 1.7
SSBP3-202ENST00000357475 DMGDHQ9UI17 866 aaKnown RBP25.66■■□□□ 1.7
SSBP3-202ENST00000357475 UGT2B4P06133 528 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 RPL21P46778 160 aaKnown RBP25.65■■□□□ 1.7
SSBP3-202ENST00000357475 MTAPQ13126 283 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 SEMA5AQ13591 1074 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 TEX35Q5T0J7 233 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 ANKRD22Q5VYY1 191 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 KCTD11Q693B1 232 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 ZSWIM9Q86XI8 627 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 KLHDC8BQ8IXV7 354 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 PDCD7Q8N8D1 485 aaKnown RBP25.65■■□□□ 1.7
SSBP3-202ENST00000357475 MRGPRX2Q96LB1 330 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 ERP44Q9BS26 406 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 DPH5Q9H2P9 285 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 PPM1HQ9ULR3 514 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 SNX24Q9Y343 169 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 RAI2Q9Y5P3 530 aa25.65■■□□□ 1.7
SSBP3-202ENST00000357475 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.64■■□□□ 1.7
SSBP3-202ENST00000357475 TRAFD1O14545 582 aaPredicted RBP25.64■■□□□ 1.7
SSBP3-202ENST00000357475 SERPINF2P08697 491 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 RHOXF2BP0C7M4 288 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 RPS9P46781 194 aaKnown RBP25.64■■□□□ 1.7
SSBP3-202ENST00000357475 STARD3Q14849 445 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 DUPD1Q68J44 220 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 SYT13Q7L8C5 426 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 IPMKQ8NFU5 416 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 CPT1BQ92523 772 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 SMIM14Q96QK8 99 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 RHOXF2Q9BQY4 288 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 CPEB1Q9BZB8 566 aaKnown RBP25.64■■□□□ 1.7
SSBP3-202ENST00000357475 RSPH9Q9H1X1 276 aaPredicted RBP25.64■■□□□ 1.7
SSBP3-202ENST00000357475 EPC1Q9H2F5 836 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 HAUS2Q9NVX0 235 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 FAM153AQ9UHL3 310 aa25.64■■□□□ 1.7
SSBP3-202ENST00000357475 ESYT3A0FGR9 886 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 EFCAB8A8MWE9 144 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 PLK4O00444 970 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 USP12O75317 370 aa25.63■■□□□ 1.69
SSBP3-202ENST00000357475 HEXIM1O94992 359 aaKnown RBP25.63■■□□□ 1.69
SSBP3-202ENST00000357475 PDHA1P08559 390 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms