RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 HARS2P49590 506 aaKnown RBP12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 ERFP50548 548 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 MTTPP55157 894 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 HDAC4P56524 1084 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 PDK2Q15119 407 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 MMEL1Q495T6 779 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 FBXL19Q6PCT2 694 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 FAM131BQ86XD5 332 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 TMEM126BQ8IUX1 230 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 FBXW8Q8N3Y1 598 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 SPPL3Q8TCT6 385 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC26A7Q8TE54 656 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 CMTM5Q96DZ9 223 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 C8orf48Q96LL4 319 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 SORT1Q99523 831 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 OSER1Q9NX31 292 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 AFF4Q9UHB7 1163 aaKnown RBP12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 USP3Q9Y6I4 520 aa12.86□□□□□ -0.35
RTFDC1-202ENST00000357348 ZNF487B1APH4 448 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 CAPN15O75808 1086 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 ABLIM3O94929 683 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 PROCP04070 461 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 PRKCGP05129 697 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 GRK2P25098 689 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 MAGEA11P43364 429 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 INSCQ1MX18 579 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 MROH9Q5TGP6 573 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 ARMC3Q5W041 872 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 PM20D1Q6GTS8 502 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 ATG14Q6ZNE5 492 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 RBM23Q86U06 439 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 TFB1MQ8WVM0 346 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 IRGQQ8WZA9 623 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 FBXO32Q969P5 355 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 TLR9Q9NR96 1032 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 GMIPQ9P107 970 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 SFMBT1Q9UHJ3 866 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 PER2O15055 1255 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 TGM5O43548 720 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 LILRB3O75022 631 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 DAB1O75553 588 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 GCATO75600 419 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 LYPLA1O75608 230 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 CAPNS1P04632 268 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 ETS2P15036 469 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 NOS2P35228 1153 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 FDFT1P37268 417 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 RPL5P46777 297 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 NUMBP49757 651 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 FOLH1Q04609 750 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 DEUP1Q05D60 604 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 NIPAL4Q0D2K0 466 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 TBL3Q12788 808 aaKnown RBP12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 TWF1Q12792 350 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 TAF10Q12962 218 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 MAP7Q14244 749 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 KRT81Q14533 505 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 PCLAFQ15004 111 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 SYCP2LQ5T4T6 812 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 BTBD8Q5XKL5 378 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 SCD5Q86SK9 330 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 SATL1Q86VE3 508 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 POU5F2Q8N7G0 328 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 ARNTL2Q8WYA1 636 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 GDF15Q99988 308 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 OXCT2Q9BYC2 517 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 NKX2-4Q9H2Z4 354 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 C6orf203Q9P0P8 240 aaPredicted RBP12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 HSFX1Q9UBD0 423 aa12.85□□□□□ -0.35
RTFDC1-202ENST00000357348 C15orf38-AP3S2A0A0A6YYH1 394 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 SLC38A8A6NNN8 435 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 MDM4O15151 490 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 VILLO15195 856 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 SORBS2O94875 1100 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 TBX18O95935 607 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 TFAP2AP05549 437 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 YWHAQP27348 245 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 RPL10AP62906 217 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 NAB1Q13506 487 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 CAMK1Q14012 370 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 RAB33AQ14088 237 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 TRIP10Q15642 601 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 OTUD1Q5VV17 481 aaPredicted RBP12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 PDPK2PQ6A1A2 396 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 C1orf228Q6PIY5 440 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 ARPINQ7Z6K5 226 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 TICAM1Q8IUC6 712 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 MAP7D3Q8IWC1 876 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 CCDC185Q8N715 623 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 ICA1LQ8NDH6 482 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 HIC2Q96JB3 615 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 RBM38Q9H0Z9 239 aaKnown RBP12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 PIGVQ9NUD9 493 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 DCDC2Q9UHG0 476 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 PSMD13Q9UNM6 376 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 YIPF1Q9Y548 306 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 DPYSL4O14531 572 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 APOL1O14791 398 aa12.84□□□□□ -0.35
RTFDC1-202ENST00000357348 MSI1O43347 362 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms