RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 FBXL8Q96CD0 374 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 KCTD15Q96SI1 283 aaPredicted RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 CCDC106Q9BWC9 280 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 VRTNQ9H8Y1 702 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 NARFQ9UHQ1 456 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 IFT52Q9Y366 437 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 SPATA31A1Q5TZJ5 1347 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 GOLGA4Q13439 2230 aaKnown RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 ENDOUP21128 410 aaKnown RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 MMP8P22894 467 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 KDELR1P24390 212 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 CCNIQ14094 377 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 EMC2Q15006 297 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 MFSD7Q6UXD7 560 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 ZYG11AQ6WRX3 759 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 SLC15A3Q8IY34 581 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 HTR3CQ8WXA8 447 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 HSD17B14Q9BPX1 270 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 SLA2Q9H6Q3 261 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 SNX9Q9Y5X1 595 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 LOC102724428A0A0B4J2F2 783 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 B8ZZF3 427 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 SLC16A4O15374 487 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 TPST1O60507 370 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 PLIN3O60664 434 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 ENTPD3O75355 529 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 CHRNB1P11230 501 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 HNF4AP41235 474 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 MAGEA6P43360 314 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 SIK1P57059 783 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 GNA12Q03113 381 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 RC3H1Q5TC82 1133 aaKnown RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 TIGD7Q6NT04 549 aaPredicted RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 DENND1BQ6P3S1 775 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 ARMC8Q8IUR7 673 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 RNF148Q8N7C7 305 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 SLC4A11Q8NBS3 891 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 CCNYQ8ND76 341 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 DGCR6LQ9BY27 220 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 RNPEPQ9H4A4 650 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 UBP1Q9NZI7 540 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 PLA2G4CQ9UP65 541 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 DGKBQ9Y6T7 804 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 PRR23D1E9PI22 279 aaPredicted RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 AVILO75366 819 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 IFNA16P05015 189 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 PRR23D2P0DMB1 279 aaPredicted RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 HLCSP50747 726 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 RHDQ02161 417 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 MTM1Q13496 603 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 KCNJ11Q14654 390 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 INTS6LQ5JSJ4 861 aaKnown RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 DUS1LQ6P1R4 473 aaKnown RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 SCYL2Q6P3W7 929 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 MMAAQ8IVH4 418 aaKnown RBP6.63□□□□□ -1.35
TRIM38-201ENST00000357085 GLIS3Q8NEA6 775 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 FNIP2Q9P278 1114 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 NUMBLQ9Y6R0 609 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 ZNF831Q5JPB2 1677 aa6.63□□□□□ -1.35
TRIM38-201ENST00000357085 ARPC4-TTLL3A0A0A6YYG9 625 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 KRBA1A5PL33 1030 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 H3BNH8 94 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 AURKAO14965 403 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 ABCB7O75027 752 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 LYPLA1O75608 230 aaPredicted RBP6.62□□□□□ -1.35
TRIM38-201ENST00000357085 GRIK2Q13002 908 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 SNAPC2Q13487 334 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 VPS72Q15906 364 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 TJAP1Q5JTD0 557 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.62□□□□□ -1.35
TRIM38-201ENST00000357085 LRP10Q7Z4F1 713 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 GALNT6Q8NCL4 622 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 C9orf43Q8TAL5 461 aaPredicted RBP6.62□□□□□ -1.35
TRIM38-201ENST00000357085 PWWP2AQ96N64 755 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 MRIQ9BWK5 157 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 EBF1Q9UH73 591 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 YES1P07947 543 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 EEFSECP57772 596 aaKnown RBP6.62□□□□□ -1.35
TRIM38-201ENST00000357085 ABRQ12979 859 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 KLF1Q13351 362 aaPredicted RBP6.62□□□□□ -1.35
TRIM38-201ENST00000357085 SPCS2Q15005 226 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 DCAF4L1Q3SXM0 396 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 ZCCHC8Q6NZY4 707 aaKnown RBP6.62□□□□□ -1.35
TRIM38-201ENST00000357085 CCDC81Q6ZN84 652 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 DSELQ8IZU8 1212 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 EFCAB3Q8N7B9 438 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 C19orf18Q8NEA5 215 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 EIF3LQ9Y262 564 aaKnown RBP6.62□□□□□ -1.35
TRIM38-201ENST00000357085 BCS1LQ9Y276 419 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 FARP1Q9Y4F1 1045 aaPredicted RBP6.62□□□□□ -1.35
TRIM38-201ENST00000357085 ZSCAN5BA6NJL1 495 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 BTN3A3O00478 584 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 ITGA2P17301 1181 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 CFL1P23528 166 aaKnown RBP6.62□□□□□ -1.35
TRIM38-201ENST00000357085 THOP1P52888 689 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 CNTN2Q02246 1040 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 PRKG1Q13976 671 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 QPRTQ15274 297 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 ATP6AP1Q15904 470 aa6.62□□□□□ -1.35
TRIM38-201ENST00000357085 CPSF7Q8N684 471 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms