RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 HSPA1AP0DMV8 641 aaKnown RBP19.1■□□□□ 0.65
PRPF39-201ENST00000355765 HSPA1BP0DMV9 641 aaKnown RBP19.1■□□□□ 0.65
PRPF39-201ENST00000355765 NDST1P52848 882 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 CSE1LP55060 971 aaKnown RBP19.1■□□□□ 0.65
PRPF39-201ENST00000355765 GRM1Q13255 1194 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 BFSP2Q13515 415 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 ZPBP2Q6X784 338 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 TMEM110Q86TL2 294 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 MFSD2AQ8NA29 543 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 SHCBP1Q8NEM2 672 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 SLC7A14Q8TBB6 771 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 CLEC4CQ8WTT0 213 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 STARD8Q92502 1023 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 KHSRPQ92945 711 aaKnown RBP eCLIP19.1■□□□□ 0.655e-10■■■□□ 16.6
PRPF39-201ENST00000355765 TBCBQ99426 244 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 MRPL40Q9NQ50 206 aaKnown RBP19.1■□□□□ 0.65
PRPF39-201ENST00000355765 ATAD3AQ9NVI7 634 aa19.1■□□□□ 0.65
PRPF39-201ENST00000355765 A8MU76 341 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 EI24O14681 340 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 CABYRO75952 493 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 PRKCBP05771 671 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 NCAM1P13591 858 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 YBX3P16989 372 aaKnown RBP eCLIP19.09■□□□□ 0.65
PRPF39-201ENST00000355765 IDUAP35475 653 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 PSMD8P48556 350 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 PRPSAP1Q14558 356 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 USP10Q14694 798 aaKnown RBP19.09■□□□□ 0.65
PRPF39-201ENST00000355765 GOLGA7BQ2TAP0 167 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 CERCAMQ5T4B2 595 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 CNSTQ6PJW8 725 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 ABRAXAS1Q6UWZ7 409 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 DNAJC14Q6Y2X3 702 aaPredicted RBP19.09■□□□□ 0.65
PRPF39-201ENST00000355765 HERC2P3Q9BVR0 1158 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 UTRNP46939 3433 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 TANC1Q9C0D5 1861 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 ZCWPW2A0A1B0GU75 182 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 NEMP2A6NFY4 417 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 SLCO1B7G3V0H7 640 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 B4GALT5O43286 388 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 DDHD2O94830 711 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 IL18RAPO95256 599 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 VDRP11473 427 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 TPH1P17752 444 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 CHRNA5P30532 468 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 TTKP33981 857 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 SAMD4BQ5PRF9 694 aaKnown RBP19.09■□□□□ 0.65
PRPF39-201ENST00000355765 EEF1DP3Q658K8 133 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 KCNMB4Q86W47 210 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 ZNF354CQ86Y25 554 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 ZNF567Q8N184 647 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 C1QTNF1Q9BXJ1 281 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 EIF2AQ9BY44 585 aaKnown RBP19.09■□□□□ 0.65
PRPF39-201ENST00000355765 TRIM8Q9BZR9 551 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 LRRC40Q9H9A6 602 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 NANOGQ9H9S0 305 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 MID2Q9UJV3 735 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 GIT1Q9Y2X7 761 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 TCAF1Q9Y4C2 921 aa19.09■□□□□ 0.65
PRPF39-201ENST00000355765 TPD52L2O43399 206 aaKnown RBP19.08■□□□□ 0.65
PRPF39-201ENST00000355765 NR2C2P49116 596 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 IGBP1P78318 339 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 IFRD2Q12894 506 aaPredicted RBP19.08■□□□□ 0.65
PRPF39-201ENST00000355765 ZNF618Q5T7W0 954 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 PID1Q7Z2X4 250 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 SLC41A1Q8IVJ1 513 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 CADM3Q8N126 398 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.08■□□□□ 0.65
PRPF39-201ENST00000355765 NAT16Q8N8M0 369 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 CXorf38Q8TB03 319 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 CPB2Q96IY4 423 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 TNFRSF12AQ9NP84 129 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 TMPRSS4Q9NRS4 437 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 VANGL2Q9ULK5 521 aa19.08■□□□□ 0.65
PRPF39-201ENST00000355765 MGAMO43451 1857 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 OXTRP30559 389 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 OPRL1P41146 370 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 DPYSL2Q16555 572 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 PELI3Q8N2H9 469 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 LRRC71Q8N4P6 559 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 PCYOX1LQ8NBM8 494 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 RNF149Q8NC42 400 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 KLHL25Q9H0H3 589 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 PALMDQ9NP74 551 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 TMEM181Q9P2C4 612 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 CPQQ9Y646 472 aa19.08■□□□□ 0.64
PRPF39-201ENST00000355765 TRIM64A6NGJ6 449 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 C9JVG2 144 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 UBDO15205 165 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 MT-ND1P03886 318 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 PABPC1P11940 636 aaKnown RBP19.07■□□□□ 0.64
PRPF39-201ENST00000355765 HMGB2P26583 209 aaKnown RBP19.07■□□□□ 0.64
PRPF39-201ENST00000355765 CMTR2Q8IYT2 770 aaKnown RBP19.07■□□□□ 0.64
PRPF39-201ENST00000355765 SPPL2BQ8TCT7 592 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 DUS3LQ96G46 650 aaKnown RBP19.07■□□□□ 0.64
PRPF39-201ENST00000355765 GLT1D1Q96MS3 346 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 C1orf50Q9BV19 199 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 CYP4F12Q9HCS2 524 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 CHRAC1Q9NRG0 131 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 SLC30A1Q9Y6M5 507 aa19.07■□□□□ 0.64
PRPF39-201ENST00000355765 DHRS12A0PJE2 317 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms