RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 UCN3Q969E3 161 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 SCLYQ96I15 445 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 YIPF2Q9BWQ6 316 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 FAM49AQ9H0Q0 323 aaPredicted RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 HIPK3Q9H422 1215 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 STARD7Q9NQZ5 370 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 TSPAN16Q9UKR8 245 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 CNTN6Q9UQ52 1028 aa5.73□□□□□ -1.49
CD47-201ENST00000355354 FNDC3AQ9Y2H6 1198 aaKnown RBP5.73□□□□□ -1.49
CD47-201ENST00000355354 A0A1W2PS29 197 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 SLC12A8A0AV02 714 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 KIF1CO43896 1103 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 MARCH6O60337 910 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 MTHFD2P13995 350 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 CLCQ05315 142 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 ADAM15Q13444 863 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 RAB30Q15771 203 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 ALFQ53S48 1182 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 RABL3Q5HYI8 236 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 ZNF280BQ86YH2 543 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 WFDC5Q8TCV5 224 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 RPL3LQ92901 407 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 CCDC134Q9H6E4 229 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 ATP11BQ9Y2G3 1177 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 FIS1Q9Y3D6 152 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 CHUKO15111 745 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 CDH16O75309 829 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 AGTP01019 485 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 CA3P07451 260 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 ACRP10323 421 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 PSMB4P28070 264 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 ALDH4A1P30038 563 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 POLR2BP30876 1174 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 GRK5P34947 590 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 BRCC3P46736 316 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 CSRP3P50461 194 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 LAMTOR4Q0VGL1 99 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 GRB7Q14451 532 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 RUNDC3AQ59EK9 446 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 RSBN1Q5VWQ0 802 aaPredicted RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 OTOP2Q7RTS6 562 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 TICAM1Q8IUC6 712 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 SFTPA2Q8IWL1 248 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 DCLK2Q8N568 766 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 SIMC1Q8NDZ2 872 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 CALR3Q96L12 384 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 NUDCD1Q96RS6 583 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 EBF1Q9UH73 591 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 E7ESA3 106 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 ALOX15BO15296 676 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 DIRAS1O95057 198 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 PARNO95453 639 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 ME2P23368 584 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 CCR3P51677 355 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 LAPTM5Q13571 262 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 TRIP10Q15642 601 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 PDK4Q16654 411 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 KRT39Q6A163 491 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 ZNF549Q6P9A3 640 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 TRIM67Q6ZTA4 783 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 KIAA2013Q8IYS2 634 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 OR10T2Q8NGX3 314 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 PTERQ96BW5 349 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 MRPL38Q96DV4 380 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 GATA5Q9BWX5 397 aaPredicted RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 TMEM120AQ9BXJ8 343 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 GEMIN8Q9NWZ8 242 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 SLCO3A1Q9UIG8 710 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 J3KR12 359 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 HSF2BPO75031 334 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 C1RP00736 705 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 NPR3P17342 541 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 PROZP22891 400 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 PIGAP37287 484 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 SERPINB4P48594 390 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 DRG2P55039 364 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 CAPRIN1Q14444 709 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 DGLUCYQ7Z3D6 616 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 DTWD1Q8N5C7 304 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 PABPC5Q96DU9 382 aaKnown RBP5.72□□□□□ -1.49
CD47-201ENST00000355354 PLEKHG4BQ96PX9 1271 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 BTBD2Q9BX70 525 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 PCDH18Q9HCL0 1135 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 LRP4O75096 1905 aa5.72□□□□□ -1.49
CD47-201ENST00000355354 C10orf142B7Z368 130 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 SH3BGRLO75368 114 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 TJP3O95049 919 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 KRT19P08727 400 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 NCK1P16333 377 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 ZNF76P36508 570 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 NKX2-5P52952 324 aaPredicted RBP5.71□□□□□ -1.49
CD47-201ENST00000355354 NRG1Q02297 640 aaPredicted RBP5.71□□□□□ -1.49
CD47-201ENST00000355354 GKAP1Q5VSY0 366 aaPredicted RBP5.71□□□□□ -1.49
CD47-201ENST00000355354 NCBP2-AS2Q69YL0 99 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 TAS1R1Q7RTX1 841 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 TSEN54Q7Z6J9 526 aaKnown RBP5.71□□□□□ -1.49
CD47-201ENST00000355354 CLDN19Q8N6F1 224 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 ATL2Q8NHH9 583 aa5.71□□□□□ -1.49
CD47-201ENST00000355354 SYN2Q92777 582 aaPredicted RBP5.71□□□□□ -1.49
CD47-201ENST00000355354 TBCBQ99426 244 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms