RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 RTP4Q96DX8 246 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 POLR3FQ9H1D9 316 aaPredicted RBP10.96□□□□□ -0.66
SND1-201ENST00000354725 S100A14Q9HCY8 104 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 TEX264Q9Y6I9 313 aa10.96□□□□□ -0.66
SND1-201ENST00000354725 PDCD11Q14690 1871 aaKnown RBP10.95□□□□□ -0.66
SND1-201ENST00000354725 FADS2P1A8MWK0 482 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 PRRT4C9JH25 899 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 SEPT4O43236 478 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 CCL5P13501 91 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 ADRA1DP25100 572 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 CST5P28325 142 aaPredicted RBP10.95□□□□□ -0.66
SND1-201ENST00000354725 DSC3Q14574 896 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 ITPRIPL1Q6GPH6 555 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 LRRC6Q86X45 466 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 FBXO16Q8IX29 292 aaPredicted RBP10.95□□□□□ -0.66
SND1-201ENST00000354725 PAFAH2Q99487 392 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 PIP5K1AQ99755 562 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 TMEM121Q9BTD3 319 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 KLC2Q9H0B6 622 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 LHX5Q9H2C1 402 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 NGRNQ9NPE2 291 aaKnown RBP10.95□□□□□ -0.66
SND1-201ENST00000354725 ATP11BQ9Y2G3 1177 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 BPTFQ12830 3046 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 PI4K2BG5E9Z4 385 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 GPC4O75487 556 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 IL1R2P27930 398 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 CCND2P30279 289 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 ARL1P40616 181 aaPredicted RBP10.95□□□□□ -0.66
SND1-201ENST00000354725 CASP2P42575 452 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 RAP1GDS1P52306 607 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 TFDP1Q14186 410 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 KCNJ11Q14654 390 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 SLFN12LQ6IEE8 588 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 TAS2R42Q7RTR8 314 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 MAMDC2Q7Z304 686 aaPredicted RBP10.95□□□□□ -0.66
SND1-201ENST00000354725 ZNF540Q8NDQ6 660 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 CMASQ8NFW8 434 aaPredicted RBP10.95□□□□□ -0.66
SND1-201ENST00000354725 RADILQ96JH8 1075 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 KLHL11Q9NVR0 708 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
SND1-201ENST00000354725 IGSF9Q9P2J2 1179 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 GIMAP2Q9UG22 337 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 PPM1HQ9ULR3 514 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 SNX6Q9UNH7 406 aa10.95□□□□□ -0.66
SND1-201ENST00000354725 TCRBV7S3A2A0A539 114 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 LRCH4O75427 683 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 BANF1O75531 89 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 OR5F1O95221 314 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 KRT1P04264 644 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 PSAPP07602 524 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 CA4P22748 312 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 GRK2P25098 689 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 ASPAP45381 313 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 ARHGAP1Q07960 439 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 PDIA2Q13087 525 aaKnown RBP10.94□□□□□ -0.66
SND1-201ENST00000354725 PLD1Q13393 1074 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 APOFQ13790 326 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 EMC2Q15006 297 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 LRRC36Q1X8D7 754 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 ARHGEF16Q5VV41 709 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 IDO2Q6ZQW0 420 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 WDR49Q8IV35 697 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 MARVELD2Q8N4S9 558 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 ZNF565Q8N9K5 539 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 TCP10LQ8TDR4 215 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 SLC44A1Q8WWI5 657 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 XYLT2Q9H1B5 865 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 SP140LQ9H930 580 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 MOV10Q9HCE1 1003 aaKnown RBP10.94□□□□□ -0.66
SND1-201ENST00000354725 RBAKQ9NYW8 714 aaPredicted RBP10.94□□□□□ -0.66
SND1-201ENST00000354725 FAM8A1Q9UBU6 413 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 CYTH4Q9UIA0 394 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 PLA2G4CQ9UP65 541 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 SLC8A2Q9UPR5 921 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 TANC1Q9C0D5 1861 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 CYP17A1P05093 508 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 CAPN1P07384 714 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 RPL22P35268 128 aaKnown RBP10.94□□□□□ -0.66
SND1-201ENST00000354725 GABRB2P47870 512 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 NUBP1P53384 320 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 PLIN5Q00G26 463 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 PTK2BQ14289 1009 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 TRIM16LQ309B1 348 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 DUSP28Q4G0W2 176 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 PPP6R3Q5H9R7 873 aaPredicted RBP10.94□□□□□ -0.66
SND1-201ENST00000354725 CES4AQ5XG92 561 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 IQSEC1Q6DN90 963 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 AAGABQ6PD74 315 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 PAOXQ6QHF9 649 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 TMC5Q6UXY8 1006 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 ADGRG6Q86SQ4 1221 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 MTDHQ86UE4 582 aaKnown RBP10.94□□□□□ -0.66
SND1-201ENST00000354725 DCP2Q8IU60 420 aaKnown RBP10.94□□□□□ -0.66
SND1-201ENST00000354725 KIAA2013Q8IYS2 634 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 ANKRD53Q8N9V6 530 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 MCEEQ96PE7 176 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.94□□□□□ -0.662e-6■■■□□ 15.7
SND1-201ENST00000354725 ZNF696Q9H7X3 374 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 SLC17A7Q9P2U7 560 aa10.94□□□□□ -0.66
SND1-201ENST00000354725 SH3BGRL2Q9UJC5 107 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms