RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 R3HDM2Q9Y2K5 976 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 RALGAPBQ86X10 1494 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 C9orf118A6NHY6 69 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CGB1A6NKQ9 187 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PAPSS1O43252 624 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 MFAP3LO75121 409 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SEMA7AO75326 666 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CCNDBP1O95273 360 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SLU7O95391 586 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 INHBBP09529 407 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 C1SP09871 688 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SUPT20HL2P0C7V6 817 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 NR2F6P10588 404 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 IGFBP2P18065 325 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ATP6V1E1P36543 226 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CAPZA2P47755 286 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 VPS41P49754 854 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CLK3P49761 638 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CAMPP49913 170 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 TLE3Q04726 772 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SLC14A1Q13336 389 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PUM1Q14671 1186 aaKnown RBP eCLIP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 KCNB1Q14721 858 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 MFSD13AQ14CX5 517 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PPP2R5BQ15173 497 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 TBRG1Q3YBR2 411 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SUPT20HL1Q3ZLR7 823 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 WDR93Q6P2C0 686 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ALKBH5Q6P6C2 394 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 TEX38Q6PEX7 206 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SLC39A5Q6ZMH5 540 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CFAP77Q6ZQR2 320 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 Q6ZSN1 163 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 OTOAQ7RTW8 1153 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 RPAP2Q8IXW5 612 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SLC35F3Q8IY50 421 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 TNIP2Q8NFZ5 429 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 TEKT4Q8WW24 435 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ASB10Q8WXI3 467 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 AKAP1Q92667 903 aaKnown RBP eCLIP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 MMADHCQ9H3L0 296 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 AKIP1Q9NQ31 210 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 INTS13Q9NVM9 706 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 HCN3Q9P1Z3 774 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 GTF3C4Q9UKN8 822 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PLAGL1Q9UM63 463 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 NFU1Q9UMS0 254 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ZFR2Q9UPR6 939 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 MYOM1P52179 1685 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ZC3H13Q5T200 1668 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SALL3Q9BXA9 1300 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 A0A1W2PPM1 405 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CBY3A6NI87 242 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 A8MVJ9 347 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 RRHO14718 337 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 BCAT2O15382 392 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CHRM4P08173 479 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 KRT10P13645 584 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF37AP17032 561 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ATF7P17544 494 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SFPQP23246 707 aaKnown RBP eCLIP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ADRA1DP25100 572 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 POU1F1P28069 291 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SLC8A1P32418 973 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 GJC1P36383 396 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 AMPHP49418 695 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SLC25A3Q00325 362 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ECT2LQ008S8 904 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 TAP1Q03518 808 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CCDC15Q0P6D6 951 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CSTF3Q12996 717 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SLMAPQ14BN4 828 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 BEAN1Q3B7T3 259 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PLEKHS1Q5SXH7 462 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 LCE5AQ5TCM9 118 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SLFN13Q68D06 897 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 Q6ZWC4 215 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 NUP54Q7Z3B4 507 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ZNF595Q8IYB9 648 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 THNSL1Q8IYQ7 743 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CADM3Q8N126 398 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 RBM15BQ8NDT2 890 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 OR52L2PQ8NGH6 319 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 FEZF2Q8TBJ5 459 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ATOH1Q92858 354 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PTP4A1Q93096 173 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 PTERQ96BW5 349 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 TMCO6Q96DC7 493 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SAAL1Q96ER3 474 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 VPS50Q96JG6 964 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 C20orf173Q96LM9 149 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 CCDC114Q96M63 670 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 OSBPL9Q96SU4 736 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 NAA11Q9BSU3 229 aaPredicted RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 ACAT2Q9BWD1 397 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 XPO4Q9C0E2 1151 aaKnown RBP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 SLC28A3Q9HAS3 691 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 NRIP3Q9NQ35 241 aa1.71□□□□□ -2.14
BRCA1-202ENST00000354071 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.71□□□□□ -2.14
BRCA1-202ENST00000354071 TRMT1Q9NXH9 659 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms