RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 DPP6P42658 865 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 ATP5OP48047 213 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 TKTL1P51854 596 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 MAP3K7CLP57077 242 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 BNC1Q01954 994 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 GUCY1A3Q02108 690 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 GRIK2Q13002 908 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 KCNJ11Q14654 390 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 RTP5Q14D33 572 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 CRY1Q16526 586 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 KYNUQ16719 465 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 SLC45A4Q5BKX6 768 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 DARS2Q6PI48 645 aaKnown RBP8.4□□□□□ -1.06
CD44-205ENST00000352818 BHLHA9Q7RTU4 235 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 PRUNE1Q86TP1 453 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 SPATS2Q86XZ4 545 aaKnown RBP8.4□□□□□ -1.06
CD44-205ENST00000352818 SFTPA1Q8IWL2 248 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 CCDC185Q8N715 623 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 EXD3Q8N9H8 876 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 FAM71DQ8N9W8 422 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 ATP11CQ8NB49 1132 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 LEMD2Q8NC56 503 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 ZMIZ2Q8NF64 920 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 SETD7Q8WTS6 366 aaKnown RBP8.4□□□□□ -1.06
CD44-205ENST00000352818 MYLPFQ96A32 169 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 FAM149B1Q96BN6 582 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 ZNF512Q96ME7 567 aaPredicted RBP8.4□□□□□ -1.06
CD44-205ENST00000352818 OLFM3Q96PB7 478 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 CSPG4P5Q96PW8 444 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 CRISPLD1Q9H336 500 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 SAYSD1Q9NPB0 183 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 GPATCH2LQ9NWQ4 482 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 SAE1Q9UBE0 346 aaPredicted RBP8.4□□□□□ -1.06
CD44-205ENST00000352818 SLC24A2Q9UI40 661 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 GGA2Q9UJY4 613 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 PCDHB8Q9UN66 801 aa8.4□□□□□ -1.06
CD44-205ENST00000352818 FNDC3AQ9Y2H6 1198 aaKnown RBP8.4□□□□□ -1.06
CD44-205ENST00000352818 ICE1Q9Y2F5 2266 aa8.4□□□□□ -1.07
CD44-205ENST00000352818 TLDC2A0PJX2 215 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 C5orf60A6NFR6 353 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 K7EQS6 105 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 TRIM66O15016 1216 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 TRAPPC3O43617 180 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 GCATO75600 419 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 SPAG6O75602 509 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 TMEM63AO94886 807 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 ZBED1O96006 694 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 F9P00740 461 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 LTFP02788 710 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 SYPP08247 313 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 TPSB2P20231 275 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 ELF1P32519 619 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 PHBP35232 272 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 ARL4AP40617 200 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 BRCC3P46736 316 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 HCAR3P49019 387 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 ELAVL2Q12926 359 aaKnown RBP8.39□□□□□ -1.07
CD44-205ENST00000352818 NFATC3Q12968 1075 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 PAFAH1B3Q15102 231 aaKnown RBP8.39□□□□□ -1.07
CD44-205ENST00000352818 TPSAB1Q15661 275 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 LONRF1Q17RB8 773 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 EFHC2Q5JST6 749 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 ANKRD22Q5VYY1 191 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 NCBP2-AS2Q69YL0 99 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 PM20D1Q6GTS8 502 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 NPNTQ6UXI9 565 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 PDIK1LQ8N165 341 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 CCDC33Q8N5R6 958 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 MCUQ8NE86 351 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 BCAS4Q8TDM0 211 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 SNRNP27Q8WVK2 155 aaKnown RBP8.39□□□□□ -1.07
CD44-205ENST00000352818 FGF11Q92914 225 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 LRRC39Q96DD0 335 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 C9orf72Q96LT7 481 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 PWWP2AQ96N64 755 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 ULBP1Q9BZM6 244 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 KLC2Q9H0B6 622 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 DHX35Q9H5Z1 703 aaKnown RBP8.39□□□□□ -1.07
CD44-205ENST00000352818 DMAP1Q9NPF5 467 aaPredicted RBP8.39□□□□□ -1.07
CD44-205ENST00000352818 ARHGEF4Q9NR80 690 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 SENP1Q9P0U3 644 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 PRDM4Q9UKN5 801 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 CCL26Q9Y258 94 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 MTORP42345 2549 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 CELSR2Q9HCU4 2923 aa8.39□□□□□ -1.07
CD44-205ENST00000352818 KIAA1549LQ6ZVL6 1849 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 F8P00451 2351 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 M0QYT0 321 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 KCNN4O15554 427 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 B3GAT3O94766 335 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 FAM107AO95990 144 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 FYNP06241 537 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 GSTA2P09210 222 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 WEE1P30291 646 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 HTR7P34969 479 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 SLCO1A2P46721 670 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 SLC18A1P54219 525 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 HNRNPH2P55795 449 aaKnown RBP8.38□□□□□ -1.07
CD44-205ENST00000352818 ARPP19P56211 112 aa8.38□□□□□ -1.07
CD44-205ENST00000352818 IFI35P80217 286 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms